RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 SLIT2O94813 1529 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 SPDYE16A6NNV3 312 aaPredicted RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 TYROBPO43914 113 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 CFBP00751 764 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 GZMAP12544 262 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 PEX2P28328 305 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 SMARCA1P28370 1054 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 BMT2Q1RMZ1 405 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 Q4G0T1 1027 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 GDPD5Q8WTR4 605 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 ATXN3P54252 364 aaPredicted RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 AQP5P55064 265 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 ADARP55265 1226 aaKnown RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 ALCAMQ13740 583 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 HIC1Q14526 733 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 OLFML3Q9NRN5 406 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 RAB20Q9NX57 234 aa12.72□□□□□ -0.37
VDR-208ENST00000550325 NOCTQ9UK39 431 aaKnown RBP12.72□□□□□ -0.37
VDR-208ENST00000550325 MYOCOSA0A1B0GUC4 107 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 ZNF862O60290 1169 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 GAS7O60861 476 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 INHBAP08476 426 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 BASP1P80723 227 aaKnown RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 ITPK1Q13572 414 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 PDK3Q15120 406 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 CCNG2Q16589 344 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 TRMT5Q32P41 509 aaKnown RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 PABPC1LQ4VXU2 614 aaKnown RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 TCHHL1Q5QJ38 904 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 LOC100653049A0A140TA62 436 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.37
VDR-208ENST00000550325 DKC1O60832 514 aaKnown RBP eCLIP12.71□□□□□ -0.37
VDR-208ENST00000550325 KRT34O76011 436 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 GRIA2P42262 883 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 RAB3IL1Q8TBN0 382 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 NT5C1BQ96P26 610 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 IWS1Q96ST2 819 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 RTFDC1Q9BY42 306 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
VDR-208ENST00000550325 FAF1Q9UNN5 650 aaPredicted RBP12.71□□□□□ -0.37
VDR-208ENST00000550325 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 PRR5-ARHGAP8B1AHC4 643 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 SORBS2O94875 1100 aaKnown RBP12.71□□□□□ -0.38
VDR-208ENST00000550325 ARHGAP8P85298 464 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 CENPCQ03188 943 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.38
VDR-208ENST00000550325 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 ICA1LQ8NDH6 482 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 FBXO36Q8NEA4 188 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 LMO3Q8TAP4 145 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 CNBD2Q96M20 576 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 SRP68Q9UHB9 627 aaKnown RBP12.71□□□□□ -0.38
VDR-208ENST00000550325 SNED1Q8TER0 1413 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 COL4A1P02462 1669 aa12.71□□□□□ -0.38
VDR-208ENST00000550325 ZNF189O75820 626 aaPredicted RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 FDX1P10109 184 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 RBM12BQ8IXT5 1001 aaKnown RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 SETDB2Q96T68 719 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 IL1RAPL1Q9NZN1 696 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 E5RJQ4 531 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 COPEO14579 308 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 CLPTM1O96005 669 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 VCLP18206 1134 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 SLC1A1P43005 524 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 ZNF200P98182 395 aaPredicted RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 PTK7Q13308 1070 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 SMAD1Q15797 465 aaKnown RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 SEMA4DQ92854 862 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 SLCO2A1Q92959 643 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 SKA1Q96BD8 255 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 KLHL4Q9C0H6 718 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 NUP98P52948 1817 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 ABHD2P08910 425 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 GLRA2P23416 452 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 GPATCH4Q5T3I0 446 aaKnown RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 ANKS1BQ7Z6G8 1248 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 CBWD2Q8IUF1 395 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 XXYLT1Q8NBI6 393 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 CFAP36Q96G28 342 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 P2RX7Q99572 595 aaKnown RBP12.7□□□□□ -0.38
VDR-208ENST00000550325 APOL6Q9BWW8 343 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 ARHGEF38Q9NXL2 777 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 HSPBP1Q9NZL4 362 aa12.7□□□□□ -0.38
VDR-208ENST00000550325 TOM1L1O75674 476 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms