RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SLC39A4Q6P5W5 647 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 PRR23CQ6ZRP0 262 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 Q6ZS52 159 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 CEP68Q76N32 757 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 DCP1BQ8IZD4 617 aaKnown RBP14.67□□□□□ -0.06
TROAP-211ENST00000549891 TTC8Q8TAM2 541 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 RAD54LQ92698 747 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 CNTNAP3BQ96NU0 1288 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 LRRC3BQ96PB8 259 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 LPIN3Q9BQK8 851 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 PYM1Q9BRP8 204 aaKnown RBP14.67□□□□□ -0.06
TROAP-211ENST00000549891 CNTNAP3Q9BZ76 1288 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 CCSER1Q9C0I3 900 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 DPP3Q9NY33 737 aa14.67□□□□□ -0.06
TROAP-211ENST00000549891 CACNA1BQ00975 2339 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 TPRP12270 2363 aaKnown RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 SOBPA7XYQ1 873 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 ATG13O75143 517 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 ATF6P18850 670 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 PLCG1P19174 1290 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 DDX6P26196 483 aaKnown RBP eCLIP14.66□□□□□ -0.06
TROAP-211ENST00000549891 CYP4F8P98187 520 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 AMPD2Q01433 879 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 DMWDQ09019 674 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 SV2CQ496J9 727 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 WDR5BQ86VZ2 330 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 NT5DC4Q86YG4 428 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 CMTM8Q8IZV2 173 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 KRI1Q8N9T8 703 aaKnown RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 DDX1Q92499 740 aaKnown RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 ST6GALNAC4Q9H4F1 302 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
TROAP-211ENST00000549891 AGO2Q9UKV8 859 aaKnown RBP14.66□□□□□ -0.06
TROAP-211ENST00000549891 ATG2BQ96BY7 2078 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 CCDC163A0A0D9SF12 145 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 KPNA7A9QM74 516 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 IL18RAPO95256 599 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 ADRB1P08588 477 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 NMT1P30419 496 aaKnown RBP14.65□□□□□ -0.06
TROAP-211ENST00000549891 PNPLA4P41247 253 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 TNK2Q07912 1038 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 GRSF1Q12849 480 aaKnown RBP eCLIP14.65□□□□□ -0.06
TROAP-211ENST00000549891 BFSP1Q12934 665 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 KARSQ15046 597 aaKnown RBP14.65□□□□□ -0.06
TROAP-211ENST00000549891 POSTNQ15063 836 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 POMGNT1Q8WZA1 660 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 EXOC4Q96A65 974 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 HVCN1Q96D96 273 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 TMX3Q96JJ7 454 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 ZNF560Q96MR9 790 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 FIZ1Q96SL8 496 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 SLC46A2Q9BY10 475 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 KIF9Q9HAQ2 790 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 IL21Q9HBE4 155 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 ABI2Q9NYB9 513 aaPredicted RBP14.65□□□□□ -0.06
TROAP-211ENST00000549891 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 PCDHB5Q9Y5E4 795 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 STYXL1Q9Y6J8 313 aa14.65□□□□□ -0.06
TROAP-211ENST00000549891 ANKRD63C9JTQ0 380 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 HAPLN1P10915 354 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 DDIT3P35638 169 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 TSPY1Q01534 308 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 SRSF5Q13243 272 aaKnown RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 RUNX3Q13761 415 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 NFE2Q16621 373 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 ZC2HC1CQ53FD0 456 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 PPM1JQ5JR12 505 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 WDR44Q5JSH3 913 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 WSCD1Q658N2 575 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 LARP1BQ659C4 914 aaKnown RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 CC2D1AQ6P1N0 951 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 BRAPQ7Z569 592 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 FAM160A2Q8N612 972 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 GIPC2Q8TF65 315 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 LOXL4Q96JB6 756 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 GKN1Q9NS71 199 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 TDP1Q9NUW8 608 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.64□□□□□ -0.07
TROAP-211ENST00000549891 ACACBO00763 2458 aa14.64□□□□□ -0.07
TROAP-211ENST00000549891 CSH1P0DML2 217 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 CSH2P0DML3 217 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 NLRP12P59046 1061 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 TMEM196Q5HYL7 178 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 ZNF720Q7Z2F6 126 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 CACNA2D4Q7Z3S7 1137 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 LRRTM3Q86VH5 581 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 MAB21L3Q8N8X9 362 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 LRRC15Q8TF66 581 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 GAB3Q8WWW8 586 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 MRPS31Q92665 395 aaKnown RBP14.63□□□□□ -0.07
TROAP-211ENST00000549891 FAM83CQ9BQN1 747 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 SMG9Q9H0W8 520 aaKnown RBP14.63□□□□□ -0.07
TROAP-211ENST00000549891 UXTQ9UBK9 157 aaPredicted RBP14.63□□□□□ -0.07
TROAP-211ENST00000549891 SEL1LQ9UBV2 794 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 SLC8A2Q9UPR5 921 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 EXOC7Q9UPT5 735 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 EML5Q05BV3 1969 aa14.63□□□□□ -0.07
TROAP-211ENST00000549891 TRDMT1O14717 391 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms