RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PALB2Q86YC2 1186 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 NT5DC4Q86YG4 428 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 EFHBQ8N7U6 833 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 CXorf38Q8TB03 319 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 LNX1Q8TBB1 728 aaPredicted RBP18.61■□□□□ 0.57
HDAC7-227ENST00000548080 SEMA4DQ92854 862 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 SPAG5Q96R06 1193 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 APOL5Q9BWW9 433 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 RAB20Q9NX57 234 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 APEX2Q9UBZ4 518 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 IRAK3Q9Y616 596 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 TSC2P49815 1807 aa18.61■□□□□ 0.57
HDAC7-227ENST00000548080 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 LTBRP36941 435 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 NDUFV1P49821 464 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 TAF6P49848 677 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 BIRC3Q13489 604 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 VARS2Q5ST30 1063 aaKnown RBP18.6■□□□□ 0.57
HDAC7-227ENST00000548080 TDRD10Q5VZ19 366 aaKnown RBP18.6■□□□□ 0.57
HDAC7-227ENST00000548080 PHLDB3Q6NSJ2 640 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 RSPO2Q6UXX9 243 aaPredicted RBP18.6■□□□□ 0.57
HDAC7-227ENST00000548080 SPATA31D4Q6ZUB0 917 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 TRAPPC11Q7Z392 1133 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 FEZF2Q8TBJ5 459 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 PIK3R5Q8WYR1 880 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 HLA-CQ95604 372 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 PABPC5Q96DU9 382 aaKnown RBP18.6■□□□□ 0.57
HDAC7-227ENST00000548080 SENP8Q96LD8 212 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 EMILIN2Q9BXX0 1053 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 STK33Q9BYT3 514 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 STK39Q9UEW8 545 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 DNAJC12Q9UKB3 198 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 ITGA11Q9UKX5 1188 aa18.6■□□□□ 0.57
HDAC7-227ENST00000548080 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 PHACTR2O75167 634 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 AARSP49588 968 aaKnown RBP eCLIP18.59■□□□□ 0.57
HDAC7-227ENST00000548080 CDR1P51861 262 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 RAPGEF1Q13905 1077 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 CTC1Q2NKJ3 1217 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 CHP1Q99653 195 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 CLSTN3Q9BQT9 956 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 RXFP1Q9HBX9 757 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 AIPL1Q9NZN9 384 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 AJAP1Q9UKB5 411 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-227ENST00000548080 PCDHB8Q9UN66 801 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 HCFC2Q9Y5Z7 792 aa18.59■□□□□ 0.57
HDAC7-227ENST00000548080 M0QZQ0 153 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 LRRN2O75325 713 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 CST3P01034 146 aaPredicted RBP18.58■□□□□ 0.57
HDAC7-227ENST00000548080 HLA-DRAP01903 254 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 ARPP19P56211 112 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 JAM2P57087 298 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 RBP5P82980 135 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 E4F1Q66K89 784 aaPredicted RBP18.58■□□□□ 0.57
HDAC7-227ENST00000548080 ARHGEF19Q8IW93 802 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 NT5C1BQ96P26 610 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 UBE2TQ9NPD8 197 aaPredicted RBP18.58■□□□□ 0.57
HDAC7-227ENST00000548080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.58■□□□□ 0.572e-6■■■■■ 96.1
HDAC7-227ENST00000548080 CLEC1BQ9P126 229 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 THEGQ9P2T0 379 aa18.58■□□□□ 0.57
HDAC7-227ENST00000548080 UNC80Q8N2C7 3258 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 CYB561D2O14569 222 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 ZNF500O60304 480 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 VNN1O95497 513 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 OR1D2P34982 312 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 STAT1P42224 750 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 PIK3CAP42336 1068 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 CLCN4P51793 760 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 DRAP1Q14919 205 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 COL19A1Q14993 1142 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 WDR44Q5JSH3 913 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 RAD9BQ6WBX8 426 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 C17orf53Q8N3J3 647 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 C12orf76Q8N812 135 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 SLC22A17Q8WUG5 538 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 ZNF560Q96MR9 790 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 CDCA3Q99618 268 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 MTRRQ9UBK8 725 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 CDH22Q9UJ99 828 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 SSX2IPQ9Y2D8 614 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-227ENST00000548080 CDY1Q9Y6F8 540 aa18.58■□□□□ 0.56
HDAC7-227ENST00000548080 KPNA7A9QM74 516 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 SYN3O14994 580 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 CLSTN1O94985 981 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 ADH1AP07327 375 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 KCNQ1P51787 676 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 KCNC3Q14003 757 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 MTF1Q14872 753 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 ASIC2Q16515 512 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 SV2CQ496J9 727 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 CTXN3Q4LDR2 81 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 HPDLQ96IR7 371 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 KCND1Q9NSA2 647 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 FNIP2Q9P278 1114 aa18.57■□□□□ 0.56
HDAC7-227ENST00000548080 SERPING1P05155 500 aa18.56■□□□□ 0.56
HDAC7-227ENST00000548080 OR4Q2P0C623 313 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms