RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 SDCBP2Q9H190 292 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 KCND1Q9NSA2 647 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 INTUQ9ULD6 942 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 ZMYND8Q9ULU4 1186 aaPredicted RBP11.11□□□□□ -0.63
CACNB3-206ENST00000547693 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 PPP2R2CQ9Y2T4 447 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 ADGRG1Q9Y653 693 aa11.11□□□□□ -0.63
CACNB3-206ENST00000547693 SF3B1O75533 1304 aaKnown RBP eCLIP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 A0A087X0T9 212 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 ESPNB1AK53 854 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 H7C4K7 107 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 GABRDO14764 452 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 KRT86O43790 486 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 GJB5O95377 273 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 LSM8O95777 96 aaKnown RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 TUBB4AP04350 444 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 H2AFZP0C0S5 128 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 FAM228BP0C875 321 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 SLC11A1P49279 550 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 GATMP50440 423 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 DEFB103AP81534 67 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 TSPY1Q01534 308 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 YWHAHQ04917 246 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 GFPT1Q06210 699 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 MTF1Q14872 753 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 ARHGAP29Q52LW3 1261 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 WSCD1Q658N2 575 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 OVOS1Q6IE37 1185 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 FAM117BQ6P1L5 589 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 ZNF662Q6ZS27 426 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 H2AFVQ71UI9 128 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 FIBCD1Q8N539 461 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 SLC4A11Q8NBS3 891 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 TMEM35BQ8NCS4 154 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 SLC30A5Q8TAD4 765 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 CALR3Q96L12 384 aaKnown RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 NOX5Q96PH1 765 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 RAD9AQ99638 391 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 ACBD6Q9BR61 282 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PAAF1Q9BRP4 392 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 ELOVL4Q9GZR5 314 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 MIS12Q9H081 205 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 DDX43Q9NXZ2 648 aaKnown RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 HESX1Q9UBX0 185 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 DNAJB4Q9UDY4 337 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 NAGPAQ9UK23 515 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 CDH9Q9ULB4 789 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PCDHGC3Q9UN70 934 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PRG3Q9Y2Y8 225 aaPredicted RBP11.1□□□□□ -0.63
CACNB3-206ENST00000547693 PCDHB12Q9Y5F1 795 aa11.1□□□□□ -0.63
CACNB3-206ENST00000547693 DDX3XO00571 662 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 MMEP08473 750 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 PPM1AP35813 382 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 NSFP46459 744 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 BRCC3P46736 316 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 VAV2P52735 878 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 FMO1Q01740 532 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 KRT17Q04695 432 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 ACAD10Q6JQN1 1059 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 ACOT1Q86TX2 421 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 TMEM130Q8N3G9 435 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 C3orf58Q8NDZ4 430 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 KBTBD7Q8WVZ9 684 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
CACNB3-206ENST00000547693 CYFIP2Q96F07 1278 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 VCPIP1Q96JH7 1222 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 SYT11Q9BT88 431 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 LHX5Q9H2C1 402 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 CWH43Q9H720 699 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 SPG21Q9NZD8 308 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 ATP8B3O60423 1300 aa11.09□□□□□ -0.63
CACNB3-206ENST00000547693 ANKRD62A6NC57 917 aa11.08□□□□□ -0.64
CACNB3-206ENST00000547693 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
CACNB3-206ENST00000547693 TLL1O43897 1013 aa11.08□□□□□ -0.64
CACNB3-206ENST00000547693 OAZ2O95190 189 aa11.08□□□□□ -0.64
CACNB3-206ENST00000547693 FTLP02792 175 aaPredicted RBP11.08□□□□□ -0.64
CACNB3-206ENST00000547693 SETSIPP0DME0 302 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms