RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 HTR1BP28222 390 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 MAPK9P45984 424 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 MALLQ13021 153 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 CNN3Q15417 329 aaKnown RBP5.06□□□□□ -1.6
SCAF11-210ENST00000547654 ANO6Q4KMQ2 910 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 EFCAB12Q6NXP0 572 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 NPNTQ6UXI9 565 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 DPP9Q86TI2 863 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 KIAA0319LQ8IZA0 1049 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 KRT78Q8N1N4 520 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 RNF169Q8NCN4 708 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 CAGE1Q8TC20 777 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 FATE1Q969F0 183 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 SKA1Q96BD8 255 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 LTV1Q96GA3 475 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-210ENST00000547654 WDR12Q9GZL7 423 aaKnown RBP5.06□□□□□ -1.6
SCAF11-210ENST00000547654 MYLK2Q9H1R3 596 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 BHMT2Q9H2M3 363 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 KIAA1586Q9HCI6 787 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 TUBD1Q9UJT1 453 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 RPS6KL1Q9Y6S9 549 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 FPGT-TNNI3KV9GXZ4 949 aa5.06□□□□□ -1.6
SCAF11-210ENST00000547654 THOC2Q8NI27 1593 aaKnown RBP5.06□□□□□ -1.6
SCAF11-210ENST00000547654 DRGXA6NNA5 263 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 TCERG1O14776 1098 aaKnown RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 TLR5O60602 858 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 SPDEFO95238 335 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 FAM163BP0C2L3 166 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 SRGNP10124 158 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 HSD3B1P14060 373 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 FPR1P21462 350 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 PCSK1P29120 753 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 PRIM2P49643 509 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 SP140Q13342 867 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 POLD3Q15054 466 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 CCDC157Q569K6 752 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 DGKKQ5KSL6 1271 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 ARMC6Q6NXE6 501 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 LDHAL6AQ6ZMR3 332 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 TFAP2CQ92754 450 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 COA7Q96BR5 231 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 GCC1Q96CN9 775 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 CDK5RAP3Q96JB5 506 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 TBATAQ96M53 351 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 LRFN3Q9BTN0 628 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 ISCA1Q9BUE6 129 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 DUSP26Q9BV47 211 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 KMT5AQ9NQR1 393 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 RBM12Q9NTZ6 932 aaKnown RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 TESQ9UGI8 421 aaKnown RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 L1RE1Q9UN81 338 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 MAP3K2Q9Y2U5 619 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 USP15Q9Y4E8 981 aaPredicted RBP5.05□□□□□ -1.6
SCAF11-210ENST00000547654 PCDHGB3Q9Y5G1 929 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 SNX13Q9Y5W8 968 aa5.05□□□□□ -1.6
SCAF11-210ENST00000547654 CFAP69A5D8W1 941 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 MYADML2A6NDP7 307 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 KPNA5O15131 536 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 EPB41L2O43491 1005 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 TIMM44O43615 452 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 AGR2O95994 175 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 ITGB6P18564 788 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 TNFSF4P23510 183 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 ADSLP30566 484 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 PPM1AP35813 382 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 FXR1P51114 621 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 CCT2P78371 535 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 ICA1Q05084 483 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 RESTQ13127 1097 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 DDX10Q13206 875 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 TBX2Q13207 712 aaPredicted RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 OTUD7BQ6GQQ9 843 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 ZNF280DQ6N043 979 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 MAATS1Q7Z4T9 603 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 CLASRPQ8N2M8 674 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 ZGPATQ8N5A5 531 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 MYCT1Q8N699 235 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 CGRRF1Q99675 332 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 AGO4Q9HCK5 861 aaKnown RBP5.04□□□□□ -1.6
SCAF11-210ENST00000547654 SAGE1Q9NXZ1 904 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 PGAP2Q9UHJ9 254 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 CORO2BQ9UQ03 480 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 FRMD4BQ9Y2L6 1034 aa5.04□□□□□ -1.6
SCAF11-210ENST00000547654 EXOC5O00471 708 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ZNF500O60304 480 aaPredicted RBP5.03□□□□□ -1.6
SCAF11-210ENST00000547654 CDKL5O76039 1030 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 PRSS23O95084 383 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ALDH2P05091 517 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 ABCB4P21439 1286 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 FDXRP22570 491 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 EDNRBP24530 442 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 MAPK10P53779 464 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 MTM1Q13496 603 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 BLMHQ13867 455 aa5.03□□□□□ -1.6
SCAF11-210ENST00000547654 KCTD2Q14681 263 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms