RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 MED15Q96RN5 788 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 ZCWPW1Q9H0M4 648 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 SMYD3Q9H7B4 428 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 PIDD1Q9HB75 910 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 CYP4F11Q9HBI6 524 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.12■□□□□ 0.65
BRF1-209ENST00000547052 CD207Q9UJ71 328 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 FBXW11Q9UKB1 542 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
BRF1-209ENST00000547052 TPM3P06753 285 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 ATF2P15336 505 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 EPCAMP16422 314 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 GTF2F1P35269 517 aaKnown RBP eCLIP19.11■□□□□ 0.65
BRF1-209ENST00000547052 ITIH3Q06033 890 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 ADCY1Q08828 1119 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 INTS6LQ5JSJ4 861 aaKnown RBP19.11■□□□□ 0.65
BRF1-209ENST00000547052 SPOPLQ6IQ16 392 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 ANKRD54Q6NXT1 300 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 CYP26C1Q6V0L0 522 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 IRF2BP1Q8IU81 584 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 SPATA2LQ8IUW3 424 aaPredicted RBP19.11■□□□□ 0.65
BRF1-209ENST00000547052 PPM1KQ8N3J5 372 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 EHBP1Q8NDI1 1231 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 SLC22A17Q8WUG5 538 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 PCMTD1Q96MG8 357 aaPredicted RBP19.11■□□□□ 0.65
BRF1-209ENST00000547052 RIPOR3Q96MK2 946 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 INTS2Q9H0H0 1204 aaKnown RBP19.11■□□□□ 0.65
BRF1-209ENST00000547052 ZDHHC7Q9NXF8 308 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 TAB2Q9NYJ8 693 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 BARX2Q9UMQ3 279 aaPredicted RBP19.11■□□□□ 0.65
BRF1-209ENST00000547052 PCDHB5Q9Y5E4 795 aa19.11■□□□□ 0.65
BRF1-209ENST00000547052 WDR27A2RRH5 827 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 GABRDO14764 452 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 SERPINC1P01008 464 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 C8AP07357 584 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 PDGFRBP09619 1106 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 HNRNPA1P09651 372 aaKnown RBP eCLIP19.1■□□□□ 0.65
BRF1-209ENST00000547052 CD58P19256 250 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 ASPAP45381 313 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 ALDH1A3P47895 512 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 TUFMP49411 452 aaKnown RBP19.1■□□□□ 0.65
BRF1-209ENST00000547052 CUL2Q13617 745 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 VEPH1Q14D04 833 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 KRT31Q15323 416 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 TAF12Q16514 161 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 CTC1Q2NKJ3 1217 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 SEMA4DQ92854 862 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 NT5C1AQ9BXI3 368 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 BCO2Q9BYV7 579 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 ABI2Q9NYB9 513 aaPredicted RBP19.1■□□□□ 0.65
BRF1-209ENST00000547052 HSFX1Q9UBD0 423 aa19.1■□□□□ 0.65
BRF1-209ENST00000547052 LINC01565O15544 149 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 TBC1D4O60343 1298 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 ABLIM3O94929 683 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 WEE2P0C1S8 567 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 SPATA31D3P0C874 917 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 RFX1P22670 979 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 ACAT1P24752 427 aaKnown RBP19.09■□□□□ 0.65
BRF1-209ENST00000547052 HOXA9P31269 272 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 RAP1GAPP47736 663 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 EPHB3P54753 998 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 MFAP3P55082 362 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 LRMPQ12912 555 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 COL19A1Q14993 1142 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 SPATA31D4Q6ZUB0 917 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 DHX40Q8IX18 779 aaKnown RBP19.09■□□□□ 0.65
BRF1-209ENST00000547052 TCEAL8Q8IYN2 117 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 OR10T2Q8NGX3 314 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 SLC7A14Q8TBB6 771 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 KBTBD7Q8WVZ9 684 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 FUBP3Q96I24 572 aaKnown RBP eCLIP19.09■□□□□ 0.65
BRF1-209ENST00000547052 NECTIN4Q96NY8 510 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 PGLYRP2Q96PD5 576 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 MRPL45Q9BRJ2 306 aaKnown RBP19.09■□□□□ 0.65
BRF1-209ENST00000547052 CRACR2AQ9BSW2 395 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 VPS16Q9H269 839 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 CBX8Q9HC52 389 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 ABCB6Q9NP58 842 aa19.09■□□□□ 0.65
BRF1-209ENST00000547052 LIMA1Q9UHB6 759 aaKnown RBP19.09■□□□□ 0.65
BRF1-209ENST00000547052 ADAM12O43184 909 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 ZMYND10O75800 440 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 OR4Q2P0C623 313 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 ANXA13P27216 316 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 MTHFRP42898 656 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 COPB1P53618 953 aaKnown RBP19.08■□□□□ 0.64
BRF1-209ENST00000547052 CYP27A1Q02318 531 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 GCNT1Q02742 428 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 INCA1Q0VD86 236 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 SMAD4Q13485 552 aaKnown RBP19.08■□□□□ 0.64
BRF1-209ENST00000547052 MGAT5BQ3V5L5 792 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 ATAT1Q5SQI0 421 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 RARS2Q5T160 578 aaKnown RBP19.08■□□□□ 0.64
BRF1-209ENST00000547052 IQCEQ6IPM2 695 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 LIMS2Q7Z4I7 341 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 ITIH5Q86UX2 942 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 B3GALNT2Q8NCR0 500 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 SEPT5Q99719 369 aaPredicted RBP19.08■□□□□ 0.64
BRF1-209ENST00000547052 MED10Q9BTT4 135 aa19.08■□□□□ 0.64
BRF1-209ENST00000547052 APOBEC3GQ9HC16 384 aaKnown RBP19.08■□□□□ 0.64
BRF1-209ENST00000547052 DAAM1Q9Y4D1 1078 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms