RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CCHCR1Q8TD31 782 aa10.31□□□□□ -0.76
TRAF1-203ENST00000546084 ZNF606Q8WXB4 792 aa10.31□□□□□ -0.76
TRAF1-203ENST00000546084 CCDC124Q96CT7 223 aaKnown RBP10.31□□□□□ -0.76
TRAF1-203ENST00000546084 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
TRAF1-203ENST00000546084 ACSS2Q9NR19 701 aa10.31□□□□□ -0.76
TRAF1-203ENST00000546084 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
TRAF1-203ENST00000546084 CAPN9O14815 690 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 MCF2LO15068 1137 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PRPSAP2O60256 369 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 TJP3O95049 919 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 KRT16P08779 473 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 SFNP31947 248 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 GPC3P51654 580 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 BMPR2Q13873 1038 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 DUOXA2Q1HG44 320 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 ARHGEF18Q6ZSZ5 1173 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 SMYD3Q9H7B4 428 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 HAO1Q9UJM8 370 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 NAALADL1Q9UQQ1 740 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 XIRP1Q702N8 1843 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 MYH7BA7E2Y1 1941 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 ADM5C9JUS6 153 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 GSTA1P08263 222 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 RBP3P10745 1247 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PDGFRAP16234 1089 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 KRT4P19013 534 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PDE1BQ01064 536 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 POU5F1Q01860 360 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 CACNB2Q08289 660 aaPredicted RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 TDRD10Q5VZ19 366 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 CAPRIN2Q6IMN6 1127 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 NPNTQ6UXI9 565 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 C15orf52Q6ZUT6 534 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 MCOLN2Q8IZK6 566 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PDIK1LQ8N165 341 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 GLIS1Q8NBF1 620 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 GRHL1Q9NZI5 618 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 HESX1Q9UBX0 185 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 DOCK2Q92608 1830 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PFASO15067 1338 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 ADGRA3Q8IWK6 1321 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 C2orf71A6NGG8 1288 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 ZNF286BP0CG31 522 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 POLR2BP30876 1174 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 SOX11P35716 441 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 EIF3EP60228 445 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 NCALDP61601 193 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 TMEM132BQ14DG7 1078 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 KIZQ2M2Z5 673 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 FAM160B1Q5W0V3 765 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 TXNRD3NBQ6F5E7 133 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 EFCAB12Q6NXP0 572 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PIGWQ7Z7B1 504 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 CFAP61Q8NHU2 1237 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 SPATA18Q8TC71 538 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 ACTL9Q8TC94 416 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 RANBP17Q9H2T7 1088 aaKnown RBP10.3□□□□□ -0.76
TRAF1-203ENST00000546084 CISHQ9NSE2 258 aa10.3□□□□□ -0.76
TRAF1-203ENST00000546084 PLCH1Q4KWH8 1693 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 KCNN4O15554 427 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 AVILO75366 819 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 ZBED1O96006 694 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 PECAM1P16284 738 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 DSG3P32926 999 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CA8P35219 290 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 KDSRQ06136 332 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 MMRN1Q13201 1228 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 EFTUD2Q15029 972 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 SGSM1Q2NKQ1 1148 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 PCNX4Q63HM2 1172 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 MOXD1Q6UVY6 613 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CENPUQ71F23 418 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CYP4F11Q9HBI6 524 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 HOXC10Q9NYD6 342 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 MYH11P35749 1972 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 GTPBP10A4D1E9 387 aaKnown RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 RABGGTBP53611 331 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CRADDP78560 199 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 OTUD4Q01804 1114 aaKnown RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 HIF1AQ16665 826 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 C15orf59Q2T9L4 293 aaPredicted RBP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 STYK1Q6J9G0 422 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CES3Q6UWW8 571 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CFAP57Q96MR6 1250 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 APOL2Q9BQE5 337 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRAF1-203ENST00000546084 SPATA31A6Q5VVP1 1343 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CYP2C8P10632 490 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CCND1P24385 295 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 MROH9Q5TGP6 573 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 LVRNQ6Q4G3 990 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 CATSPER4Q7RTX7 472 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 ACOT1Q86TX2 421 aa10.29□□□□□ -0.76
TRAF1-203ENST00000546084 C12orf29Q8N999 325 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms