RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NME7Q9Y5B8 376 aa21.91■■□□□ 1.1
HMGA2-211ENST00000545998 SMTNL1A8MU46 457 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 VNN2O95498 520 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 CAVIN2O95810 425 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 ATF2P15336 505 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 KCNA5P22460 613 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 ACAT1P24752 427 aaKnown RBP21.9■■□□□ 1.1
HMGA2-211ENST00000545998 PCSK1P29120 753 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 VWA3BQ502W6 1294 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 SYCE2Q6PIF2 218 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 LRRTM3Q86VH5 581 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 EHBP1Q8NDI1 1231 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 NDST4Q9H3R1 872 aa21.9■■□□□ 1.1
HMGA2-211ENST00000545998 AFF4Q9UHB7 1163 aaKnown RBP21.9■■□□□ 1.1
HMGA2-211ENST00000545998 WEE2P0C1S8 567 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 TSPY1Q01534 308 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 KRT31Q15323 416 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 SLC39A12Q504Y0 691 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 INTS6LQ5JSJ4 861 aaKnown RBP21.89■■□□□ 1.09
HMGA2-211ENST00000545998 OR6B3Q8NGW1 331 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 PKMYT1Q99640 499 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 CYP3A43Q9HB55 503 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 CBX8Q9HC52 389 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 MAFFQ9ULX9 164 aa21.89■■□□□ 1.09
HMGA2-211ENST00000545998 GTPBP10A4D1E9 387 aaKnown RBP21.88■■□□□ 1.09
HMGA2-211ENST00000545998 H3BQ06 376 aaPredicted RBP21.88■■□□□ 1.09
HMGA2-211ENST00000545998 PDGFRBP09619 1106 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 HOXB8P17481 243 aaPredicted RBP21.88■■□□□ 1.09
HMGA2-211ENST00000545998 ADCY1Q08828 1119 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 ELMSAN1Q6PJG2 1045 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 DCP1BQ8IZD4 617 aaKnown RBP21.88■■□□□ 1.09
HMGA2-211ENST00000545998 PGLYRP2Q96PD5 576 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 TAB2Q9NYJ8 693 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 GCNT4Q9P109 453 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 LIMA1Q9UHB6 759 aaKnown RBP21.88■■□□□ 1.09
HMGA2-211ENST00000545998 CDH9Q9ULB4 789 aa21.88■■□□□ 1.09
HMGA2-211ENST00000545998 MTMR11A4FU01 709 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SEC24AO95486 1093 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 TFF2Q03403 129 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 INCA1Q0VD86 236 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SMARCB1Q12824 385 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 LRMPQ12912 555 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 LRSAM1Q6UWE0 723 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 TCEAL8Q8IYN2 117 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 C12orf76Q8N812 135 aaPredicted RBP21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SYT15Q9BQS2 421 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 CRACR2AQ9BSW2 395 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 INTS2Q9H0H0 1204 aaKnown RBP21.87■■□□□ 1.09
HMGA2-211ENST00000545998 S1PR5Q9H228 398 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SFXN1Q9H9B4 322 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 TMLHEQ9NVH6 421 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 THEGQ9P2T0 379 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 CD207Q9UJ71 328 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 C2orf16Q68DN1 1984 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 PTPRDP23468 1912 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 BECN2A8MW95 431 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 A8MXQ7 604 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 ATP2C2O75185 946 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 PAPLNO95428 1278 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 PSMC1P62191 440 aaKnown RBP21.87■■□□□ 1.09
HMGA2-211ENST00000545998 CLUL1Q15846 466 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 UVSSAQ2YD98 709 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 LEXMQ3ZCV2 418 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 LIN9Q5TKA1 542 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 FAM171BQ6P995 826 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 GBP6Q6ZN66 633 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SMRP1Q8NCR6 262 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 SLC7A14Q8TBB6 771 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 NT5C1BQ96P26 610 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 ARID3AQ99856 593 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 DPEP3Q9H4B8 488 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 GTF3C4Q9UKN8 822 aa21.87■■□□□ 1.09
HMGA2-211ENST00000545998 MYBPHLA2RUH7 354 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 LRRC10BA6NIK2 292 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 RFPL2O75678 378 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 ZMYND10O75800 440 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 C8AP07357 584 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 ATP1A3P13637 1013 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 ELF1P32519 619 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 NDST1P52848 882 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CUL2Q13617 745 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 EXOC3L4Q17RC7 722 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CCDC142Q17RM4 750 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CCDC149Q6ZUS6 474 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 RTL10Q7L3V2 364 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 APTXQ7Z2E3 356 aaKnown RBP21.86■■□□□ 1.09
HMGA2-211ENST00000545998 UNC93AQ86WB7 457 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 ATAD1Q8NBU5 361 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CMASQ8NFW8 434 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-211ENST00000545998 VPS16Q9H269 839 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CRISPLD1Q9H336 500 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CYP4F11Q9HBI6 524 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 CRTAC1Q9NQ79 661 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 ZDHHC7Q9NXF8 308 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 HMGXB4Q9UGU5 601 aa21.86■■□□□ 1.09
HMGA2-211ENST00000545998 DOCK6Q96HP0 2047 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 SPDYE4A6NLX3 237 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 CDK11BP21127 795 aaKnown RBP21.85■■□□□ 1.09
HMGA2-211ENST00000545998 CDR1P51861 262 aa21.85■■□□□ 1.09
HMGA2-211ENST00000545998 DUSP4Q13115 394 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms