RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RCOR2Q8IZ40 523 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MCOLN2Q8IZK6 566 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 DAW1Q8N136 415 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SUPT20HQ8NEM7 779 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PIGOQ8TEQ8 1089 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PARD3BQ8TEW8 1205 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SLC20A1Q8WUM9 679 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 KRT35Q92764 455 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 MASTLQ96GX5 879 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TGS1Q96RS0 853 aaKnown RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 PCDHB18PQ96TA0 734 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 P2RX7Q99572 595 aaKnown RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SENP7Q9BQF6 1050 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TRIM6Q9C030 488 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TMEM117Q9H0C3 514 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 UNC45AQ9H3U1 944 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 EURLQ9NYK6 297 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TAS2R14Q9NYV8 317 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SUFUQ9UMX1 484 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 SHOC2Q9UQ13 582 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 NEU2Q9Y3R4 380 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 TAF1LQ8IZX4 1826 aa6.85□□□□□ -1.31
SNHG1-225ENST00000545920 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 TOM1O60784 492 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 LRRN2O75325 713 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 SGPL1O95470 568 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 ANP32DO95626 131 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 LSM8O95777 96 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PDGFAP04085 211 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CYP1A1P04798 512 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CLTAP09496 248 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 UNGP13051 313 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FGFR4P22455 802 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 TBXAS1P24557 533 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PHBP35232 272 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 GCKP35557 465 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 ADCY8P40145 1251 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 RARRES1P49788 294 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PSMC5P62195 406 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 NFIAQ12857 509 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 DMP1Q13316 513 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 SNRNP35Q16560 246 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PDK4Q16654 411 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 USH1GQ495M9 461 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 BRDTQ58F21 947 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 SLC45A4Q5BKX6 768 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 WDR44Q5JSH3 913 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 C1orf220Q5T0J3 134 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 WDR78Q5VTH9 848 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FYB2Q5VWT5 728 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PCNX4Q63HM2 1172 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FAM91A1Q658Y4 838 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 MRPL14Q6P1L8 145 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 OTUD6AQ7L8S5 288 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 TBC1D1Q86TI0 1168 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PNMA8AQ86V59 439 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 PHF13Q86YI8 300 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CLEC10AQ8IUN9 316 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 ARHGEF19Q8IW93 802 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 ENDOVQ8N8Q3 282 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 MCPH1Q8NEM0 835 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 EPS8L3Q8TE67 593 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 DDX1Q92499 740 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 IFT43Q96FT9 208 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FAXDC2Q96IV6 333 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 KREMEN1Q96MU8 473 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 GPR101Q96P66 508 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CCDC28BQ9BUN5 200 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FRMD8Q9BZ67 464 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 NIF3L1Q9GZT8 377 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CCDC113Q9H0I3 377 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 C1orf112Q9NSG2 853 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 LRRC4BQ9NT99 713 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 ABCF3Q9NUQ8 709 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 RNF19AQ9NV58 838 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 FGFR1OP2Q9NVK5 253 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 RAB20Q9NX57 234 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 NINJ2Q9NZG7 142 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 LNPEPQ9UIQ6 1025 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 CORO1CQ9ULV4 474 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-225ENST00000545920 UBIAD1Q9Y5Z9 338 aa6.84□□□□□ -1.31
SNHG1-225ENST00000545920 MYH4Q9Y623 1939 aa6.84□□□□□ -1.32
SNHG1-225ENST00000545920 A0A1W2PRG0 241 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 DDTLA6NHG4 134 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM110-MUSTN1A8MSY1 372 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 DNALI1O14645 258 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-225ENST00000545920 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-225ENST00000545920 TM9SF1O15321 606 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 CLDN3O15551 220 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 CYP26A1O43174 497 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 GRIN3BO60391 1043 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 SPAG6O75602 509 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 FAM155BO75949 473 aa6.83□□□□□ -1.32
SNHG1-225ENST00000545920 TJP3O95049 919 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms