RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 EVPLLA8MZ36 301 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 NAPEPLDQ6IQ20 393 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 EFCAB12Q6NXP0 572 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 SEPT5Q99719 369 aaPredicted RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 MXRA8Q9BRK3 442 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 ERP44Q9BS26 406 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 FRMD8P1Q9BZ68 369 aaPredicted RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 DOLKQ9UPQ8 538 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 A0A1B0GW55 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 PSMD14O00487 310 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 CCDC159P0C7I6 412 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 FMR1Q06787 632 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■□□□□ 10.8
CIT-217ENST00000545913 PRPF39Q86UA1 669 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 NMRK1Q9NWW6 199 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DBR1Q9UK59 544 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 NCAM1P13591 858 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 ARL4DP49703 201 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 LONP2Q86WA8 852 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 GPAT2Q6NUI2 795 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 ARMC2Q8NEN0 867 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 FEZF2Q8TBJ5 459 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.2□□□□□ -0.46
CIT-217ENST00000545913 MARCOQ9UEW3 520 aaPredicted RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 HLA-DRAP01903 254 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 BLVRAP53004 296 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 GOLGA7BQ2TAP0 167 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 SYCP2LQ5T4T6 812 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 TRIM51Q9BSJ1 452 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 ODC1P11926 461 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 MAGEA4P43358 317 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 RUNX1T1Q06455 604 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 CSTF3Q12996 717 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 LAMC2Q13753 1193 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 SMTNL2Q2TAL5 461 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 SDE2Q6IQ49 451 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 SEC16BQ96JE7 1060 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.2□□□□□ -0.46
CIT-217ENST00000545913 MYO1GB0I1T2 1018 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 DAB1O75553 588 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 GRAP2O75791 330 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 SRP72O76094 671 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 KHDRBS2Q5VWX1 349 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 DCP1BQ8IZD4 617 aaKnown RBP12.2□□□□□ -0.46
CIT-217ENST00000545913 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 BRD8Q9H0E9 1235 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 BATF3Q9NR55 127 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 CHMP2BQ9UQN3 213 aa12.2□□□□□ -0.46
CIT-217ENST00000545913 ANXA9O76027 345 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 FDFT1P37268 417 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 SF3B3Q15393 1217 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 RFWD2Q8NHY2 731 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 ZCCHC17Q9NP64 241 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 USP31Q70CQ4 1352 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 TRPC5OSA6NMA1 111 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 KIF1CO43896 1103 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 IMPDH2P12268 514 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 RBM12Q9NTZ6 932 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 APPL1Q9UKG1 709 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 COMTP21964 271 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 TAF1CQ15572 869 aaPredicted RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 CCDC126Q96EE4 140 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 ZFP42Q96MM3 310 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 SEPT3Q9UH03 358 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 TMEM120BA0PK00 339 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 FKBP9O95302 570 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 HNRNPCP07910 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
CIT-217ENST00000545913 GEMIN4P57678 1058 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 KCNK10P57789 538 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 FKBP9P1Q75LS8 142 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 JAMLQ86YT9 394 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 IPMKQ8NFU5 416 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 PRPF18Q99633 342 aaKnown RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 MANSC1Q9H8J5 431 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 ZDHHC9Q9Y397 364 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 FER1L4A9Z1Z3 1794 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 PRR23D1E9PI22 279 aaPredicted RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 PRR23D2P0DMB1 279 aaPredicted RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 TTLL9Q3SXZ7 439 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 TFDP3Q5H9I0 405 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 E4F1Q66K89 784 aaPredicted RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 LBHD1Q9BQE6 289 aaPredicted RBP12.19□□□□□ -0.46
CIT-217ENST00000545913 CNTNAP5Q8WYK1 1306 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 VCAM1P19320 739 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 CCND1P24385 295 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 PRKCQQ04759 706 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 LVRNQ6Q4G3 990 aa12.19□□□□□ -0.46
CIT-217ENST00000545913 RBBP8Q99708 897 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms