RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CCNI2Q6ZMN8 369 aaPredicted RBP14.51□□□□□ -0.09
HCFC2-202ENST00000544223 SERINC5Q86VE9 423 aa14.51□□□□□ -0.09
HCFC2-202ENST00000544223 OR6B3Q8NGW1 331 aa14.51□□□□□ -0.09
HCFC2-202ENST00000544223 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
HCFC2-202ENST00000544223 CASKIN2Q8WXE0 1202 aa14.51□□□□□ -0.09
HCFC2-202ENST00000544223 SENP6Q9GZR1 1112 aaPredicted RBP14.51□□□□□ -0.09
HCFC2-202ENST00000544223 UPF3AQ9H1J1 476 aaKnown RBP14.51□□□□□ -0.09
HCFC2-202ENST00000544223 L1RE1Q9UN81 338 aa14.51□□□□□ -0.09
HCFC2-202ENST00000544223 F8W810 466 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 I3L4J1 428 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ATP2C2O75185 946 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 RFC1P35251 1148 aaPredicted RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 GYS2P54840 703 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 HADHBP55084 474 aaKnown RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 SNX1Q13596 522 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 BRD3Q15059 726 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 SH3PXD2AQ5TCZ1 1133 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 WDR93Q6P2C0 686 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 PHF13Q86YI8 300 aaPredicted RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 RASGEF1CQ8N431 466 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 HASPINQ8TF76 798 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ATG4AQ8WYN0 398 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 CNTN3Q9P232 1028 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 NOD1Q9Y239 953 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 PTPN22Q9Y2R2 807 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 RRP9O43818 475 aaKnown RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 MTA2O94776 668 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 CCDC130P13994 396 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 APLP1P51693 650 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 PSMC1P62191 440 aaKnown RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ADCY2Q08462 1091 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ITGA7Q13683 1181 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 SMTNL2Q2TAL5 461 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 PLEKHA7Q6IQ23 1121 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 ZNF784Q8NCA9 323 aaPredicted RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 TMEM35BQ8NCS4 154 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 GSTCDQ8NEC7 633 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 KLHDC9Q8NEP7 349 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 C1orf54Q8WWF1 131 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 RIN2Q8WYP3 895 aaPredicted RBP14.5□□□□□ -0.09
HCFC2-202ENST00000544223 DPH5Q9H2P9 285 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 TSPAN16Q9UKR8 245 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 PADI3Q9ULW8 664 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 THSD7BQ9C0I4 1608 aa14.5□□□□□ -0.09
HCFC2-202ENST00000544223 M0QZ92 97 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 INHAP05111 366 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 CTNNA1P35221 906 aaKnown RBP14.49□□□□□ -0.09
HCFC2-202ENST00000544223 FAM193AP78312 1265 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 PDE4CQ08493 712 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 MYO1EQ12965 1108 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 IRF5Q13568 498 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 KCNT1Q5JUK3 1230 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 ZFYVE27Q5T4F4 411 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 LIN9Q5TKA1 542 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 TAF2Q6P1X5 1199 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 TTC27Q6P3X3 843 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 DCUN1D2Q6PH85 259 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 UBL4BQ8N7F7 174 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
HCFC2-202ENST00000544223 B3GNT5Q9BYG0 378 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 NEUROG2Q9H2A3 272 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 BARX2Q9UMQ3 279 aaPredicted RBP14.49□□□□□ -0.09
HCFC2-202ENST00000544223 TRPV2Q9Y5S1 764 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 CASTOR2A6NHX0 329 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 POMCP01189 267 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 ADORA2BP29275 332 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 ACLYP53396 1101 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 CASP8Q14790 479 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 DNAJC24Q6P3W2 148 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 CCDC50Q8IVM0 306 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 BEST2Q8NFU1 509 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 FEZF2Q8TBJ5 459 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 CARD9Q9H257 536 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
HCFC2-202ENST00000544223 PCDHA3Q9Y5H8 950 aa14.49□□□□□ -0.09
HCFC2-202ENST00000544223 HMGCRP04035 888 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 PFKMP08237 780 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 ATICP31939 592 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 SCNN1GP51170 649 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 GOLGA7BQ2TAP0 167 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
HCFC2-202ENST00000544223 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 C3orf58Q8NDZ4 430 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 KBTBD7Q8WVZ9 684 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 RPS6KC1Q96S38 1066 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 METTL5Q9NRN9 209 aaKnown RBP14.48□□□□□ -0.09
HCFC2-202ENST00000544223 FAM105AQ9NUU6 356 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.48□□□□□ -0.09
HCFC2-202ENST00000544223 INPP5FQ9Y2H2 1132 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 PDCD11Q14690 1871 aaKnown RBP14.48□□□□□ -0.09
HCFC2-202ENST00000544223 TCRBV5S1A1TA0A578 114 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 A8MXQ7 604 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 PROSCO94903 275 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 KRT10P13645 584 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 GPD2P43304 727 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 CLCNKBP51801 687 aa14.48□□□□□ -0.09
HCFC2-202ENST00000544223 CDC42EP1Q00587 391 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms