RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 EPS8L3Q8TE67 593 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 JPH1Q9HDC5 661 aaPredicted RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 F8W810 466 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 PSMD7P51665 324 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 MASTLQ96GX5 879 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 PDLIM2Q96JY6 352 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.09■□□□□ 0.174e-10■■□□□ 11.5
CHD4-210ENST00000544040 HEY2Q9UBP5 337 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 SNX13Q9Y5W8 968 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 FOXP2O15409 715 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 CST8O60676 142 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 SOX6P35712 828 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 CDC16Q13042 620 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 ZNF669Q96BR6 464 aaPredicted RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 HIC2Q96JB3 615 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
CHD4-210ENST00000544040 RIC8BQ9NVN3 520 aa16.09■□□□□ 0.17
CHD4-210ENST00000544040 CTSHP09668 335 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 EPHA7Q15375 998 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 NAB2Q15742 525 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 TADA1Q96BN2 335 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 TRIM9Q9C026 710 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 PIF1Q9H611 641 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 ACAD9Q9H845 621 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 PAK5Q9P286 719 aa16.08■□□□□ 0.17
CHD4-210ENST00000544040 DYTNA2CJ06 578 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 LTKP29376 864 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 RBBP8Q99708 897 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 ST8SIA6P61647 398 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 DNAJC7Q99615 494 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 COQ7Q99807 217 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 FAM153AQ9UHL3 310 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 GSG1L2A8MUP6 293 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 TRIM49D1C9J1S8 452 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 DDHD2O94830 711 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 HSD17B3P37058 310 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 USP11P51784 963 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 DCAF6Q58WW2 860 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 MED15Q96RN5 788 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 KIF2CQ99661 725 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 CD209Q9NNX6 404 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 HSMCR30P0CW71 290 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 NR1I3Q14994 352 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
CHD4-210ENST00000544040 GOLGA7BQ2TAP0 167 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 PLEKHA7Q6IQ23 1121 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 SH3BP5LQ7L8J4 393 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 APPL1Q9UKG1 709 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 DOLKQ9UPQ8 538 aa16.08■□□□□ 0.16
CHD4-210ENST00000544040 POU1F1P28069 291 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 PRIM2P49643 509 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 CSTF3Q12996 717 aaKnown RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 CENPLQ8N0S6 344 aaPredicted RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 PGBD3Q8N328 593 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 USP38Q8NB14 1042 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 DEPDC7Q96QD5 511 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 SIKE1Q9BRV8 207 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 GPR63Q9BZJ6 419 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 DNMT1P26358 1616 aaKnown RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 MMP10P09238 476 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 FAM136AQ96C01 138 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 ISCUQ9H1K1 167 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.162e-9■■■■□ 22
CHD4-210ENST00000544040 TADA2AO75478 443 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 STAT5BP51692 787 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 PGS1Q32NB8 556 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 ROPN1BQ9BZX4 212 aaPredicted RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 ROPN1Q9HAT0 212 aaPredicted RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 PDP2Q9P2J9 529 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 PSMC3P17980 439 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 LDHDQ86WU2 507 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 ERP44Q9BS26 406 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 KRT84Q9NSB2 600 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 SYBUQ9NX95 663 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 CPDO75976 1380 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 NQO1P15559 274 aaKnown RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 COILP38432 576 aaPredicted RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 DDX39BQ13838 428 aaKnown RBP16.07■□□□□ 0.16
CHD4-210ENST00000544040 DENND5BQ6ZUT9 1274 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 UXS1Q8NBZ7 420 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 CALML6Q8TD86 181 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 PCDHB8Q9UN66 801 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
CHD4-210ENST00000544040 MAP3K6O95382 1288 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 ACADSP16219 412 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 GTF2H1P32780 548 aa16.06■□□□□ 0.16
CHD4-210ENST00000544040 CHI3L1P36222 383 aaPredicted RBP16.06■□□□□ 0.16
CHD4-210ENST00000544040 SARSP49591 514 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms