RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 RECQL4O94761 1208 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 PRAMEF12O95522 483 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ADH1BP00325 375 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 CD59P13987 128 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ARSAP15289 507 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 DRD1P21728 446 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 GABRR2P28476 465 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 SCNN1AP37088 669 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 EIF2S3P41091 472 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ALDH1A3P47895 512 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 QARSP47897 775 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 MCM2P49736 904 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 EPHB3P54753 998 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 AMPD2Q01433 879 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 CYP4A11Q02928 519 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 MBTD1Q05BQ5 628 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 CAPSQ13938 189 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 MXD4Q14582 209 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 NAB2Q15742 525 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 RTN1Q16799 776 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TAF1BQ53T94 588 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 RNF20Q5VTR2 975 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 LYSMD4Q5XG99 296 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 SLC8B1Q6J4K2 584 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 SLC23A3Q6PIS1 610 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 LRRC69Q6ZNQ3 347 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TOGARAM2Q6ZUX3 1019 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 OTUD6AQ7L8S5 288 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 C11orf74Q86VG3 221 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ZNF713Q8N859 430 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 LEMD2Q8NC56 503 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 C3orf58Q8NDZ4 430 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 RDM1Q8NG50 284 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ASAP3Q8TDY4 903 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ACDQ96AP0 544 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TMEM87BQ96K49 555 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 FCRL3Q96P31 734 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 POLR3CQ9BUI4 534 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 DHX33Q9H6R0 707 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 POLMQ9NP87 494 aaPredicted RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 ANO2Q9NQ90 1003 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 RBM28Q9NW13 759 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 FBXL5Q9UKA1 691 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TPCN1Q9ULQ1 816 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 NUB1Q9Y5A7 615 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 PCDHB11Q9Y5F2 797 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 TNRC6BQ9UPQ9 1833 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 HELZ2Q9BYK8 2649 aaKnown RBP5.24□□□□□ -1.57
LIMS1-214ENST00000542845 MYO16Q9Y6X6 1858 aa5.24□□□□□ -1.57
LIMS1-214ENST00000542845 URB1O60287 2271 aaKnown RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 MAST4O15021 2626 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 A0A087WWV3 80 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 ANTXRLA6NF34 631 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 GOLGA8AA7E2F4 631 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 SFI1A8K8P3 1242 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 GOLGA8BA8MQT2 603 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 UPK3BL1B0FP48 263 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 UPK3BL2E5RIL1 263 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TNFRSF10BO14763 440 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 ZBTB43O43298 467 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 DKC1O60832 514 aaKnown RBP eCLIP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 SOAT2O75908 522 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TDP2O95551 362 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 OR4Q2P0C623 313 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 KRT10P13645 584 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 MARCKSP29966 332 aaPredicted RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 GNA11P29992 359 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 YWHABP31946 246 aaKnown RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CIITAP33076 1130 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 LIFRP42702 1097 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 MMP16P51512 607 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 OSTNP61366 133 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 BFSP1Q12934 665 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 DUSP4Q13115 394 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 HNRNPDQ14103 355 aaKnown RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CTTNQ14247 550 aaKnown RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 PCBP1Q15365 356 aaKnown RBP eCLIP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TAF12Q16514 161 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 UPP1Q16831 310 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 DUOXA1Q1HG43 343 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 FBXO43Q4G163 708 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TPGS2Q68CL5 300 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CC2D1AQ6P1N0 951 aaPredicted RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CD300LGQ6UXG3 332 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 GAREM2Q75VX8 874 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 BPHLQ86WA6 291 aaPredicted RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 NAXDQ8IW45 347 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TPH2Q8IWU9 490 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 RGL4Q8IZJ4 473 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 FAM181AQ8N9Y4 354 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 MDGA1Q8NFP4 955 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 TBCKQ8TEA7 893 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 GIPC2Q8TF65 315 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CCDC12Q8WUD4 166 aaPredicted RBP5.23□□□□□ -1.57
LIMS1-214ENST00000542845 HMGB4Q8WW32 186 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 RUFY2Q8WXA3 655 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 CD101Q93033 1021 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 EXOC4Q96A65 974 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 DYDC2Q96IM9 177 aa5.23□□□□□ -1.57
LIMS1-214ENST00000542845 SPACA7Q96KW9 195 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms