RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 PIDD1Q9HB75 910 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 HSFX1Q9UBD0 423 aa15.19■□□□□ 0.02
DDX11-221ENST00000542661 TCF20Q9UGU0 1960 aaKnown RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 LRG1P02750 347 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 GNL1P36915 607 aaPredicted RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 PLD1Q13393 1074 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 MAPRE1Q15691 268 aaKnown RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 TAS1R2Q8TE23 839 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 KBTBD7Q8WVZ9 684 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 ZNF707Q96C28 371 aaPredicted RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 FAXDC2Q96IV6 333 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 UHRF1Q96T88 793 aaPredicted RBP15.18■□□□□ 0.02
DDX11-221ENST00000542661 NR2E1Q9Y466 385 aa15.18■□□□□ 0.02
DDX11-221ENST00000542661 PMM2O15305 246 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 N4BP1O75113 896 aaKnown RBP15.17■□□□□ 0.02
DDX11-221ENST00000542661 SEC24AO95486 1093 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 OR4Q2P0C623 313 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 TUFMP49411 452 aaKnown RBP15.17■□□□□ 0.02
DDX11-221ENST00000542661 CETN1Q12798 172 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 DUSP4Q13115 394 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 INTS6LQ5JSJ4 861 aaKnown RBP15.17■□□□□ 0.02
DDX11-221ENST00000542661 FAM114A1Q8IWE2 563 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 SPPL2BQ8TCT7 592 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 PGLYRP2Q96PD5 576 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 WDR6Q9NNW5 1121 aaKnown RBP15.17■□□□□ 0.02
DDX11-221ENST00000542661 ANO10Q9NW15 660 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 RAB20Q9NX57 234 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 CDH9Q9ULB4 789 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 PCDHB5Q9Y5E4 795 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 INSL5Q9Y5Q6 135 aa15.17■□□□□ 0.02
DDX11-221ENST00000542661 MTMR11A4FU01 709 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 P4HA2O15460 535 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 CCL16O15467 120 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 WEE2P0C1S8 567 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 ALDH1A3P47895 512 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 FMO5P49326 533 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
DDX11-221ENST00000542661 ZP2Q05996 745 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 STX1AQ16623 288 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 LRRTM3Q86VH5 581 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 OSTM1Q86WC4 334 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 TRIM59Q8IWR1 403 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 ATAD1Q8NBU5 361 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 OR6B3Q8NGW1 331 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 MED15Q96RN5 788 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 SYT15Q9BQS2 421 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 MRPL45Q9BRJ2 306 aaKnown RBP15.16■□□□□ 0.02
DDX11-221ENST00000542661 DNAI2Q9GZS0 605 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 NIF3L1Q9GZT8 377 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 POMKQ9H5K3 350 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 FAM124BQ9H5Z6 455 aaPredicted RBP15.16■□□□□ 0.02
DDX11-221ENST00000542661 CYP3A43Q9HB55 503 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 ABCB6Q9NP58 842 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 POLIQ9UNA4 740 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 COQ4Q9Y3A0 265 aa15.16■□□□□ 0.02
DDX11-221ENST00000542661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
DDX11-221ENST00000542661 C2orf16Q68DN1 1984 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 C19orf67A6NJJ6 358 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 LETM1O95202 739 aaPredicted RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 VNN2O95498 520 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 ACAT1P24752 427 aaKnown RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 LMO2P25791 158 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 EPHB3P54753 998 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CBWD6Q4V339 395 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CBWD3Q5JTY5 395 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CBWD5Q5RIA9 395 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 FAM171BQ6P995 826 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 C4orf50Q6ZRC1 276 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 TTC39CQ8N584 583 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 ACSF2Q96CM8 615 aaPredicted RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 FUBP3Q96I24 572 aaKnown RBP eCLIP15.15■□□□□ 0.02
DDX11-221ENST00000542661 TNIP3Q96KP6 325 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 PI4K2AQ9BTU6 479 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 ABI2Q9NYB9 513 aaPredicted RBP15.15■□□□□ 0.02
DDX11-221ENST00000542661 TMEM63CQ9P1W3 806 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CDH22Q9UJ99 828 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 YIPF1Q9Y548 306 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 CLUHO75153 1309 aa15.15■□□□□ 0.02
DDX11-221ENST00000542661 A8MXQ7 604 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 AFPP02771 609 aaKnown RBP15.14■□□□□ 0.01
DDX11-221ENST00000542661 PDGFRBP09619 1106 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 PTPN2P17706 415 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 ASPAP45381 313 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 TWF1Q12792 350 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
DDX11-221ENST00000542661 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
DDX11-221ENST00000542661 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms