RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 TTC16Q8NEE8 873 aa16.5■□□□□ 0.23
RAD9A-207ENST00000542139 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
RAD9A-207ENST00000542139 HSFX1Q9UBD0 423 aa16.5■□□□□ 0.23
RAD9A-207ENST00000542139 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.5■□□□□ 0.23
RAD9A-207ENST00000542139 ADAMTS20P59510 1910 aa16.5■□□□□ 0.23
RAD9A-207ENST00000542139 MAP3K13O43283 966 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 ODC1P11926 461 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 BCKDHBP21953 392 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 DDX6P26196 483 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAD9A-207ENST00000542139 GJA4P35212 333 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 MATR3P43243 847 aaKnown RBP eCLIP16.49■□□□□ 0.23
RAD9A-207ENST00000542139 SCRN1Q12765 414 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 HAUS3Q68CZ6 603 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 LPCAT2Q7L5N7 544 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 SPACA7Q96KW9 195 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 BHMT2Q9H2M3 363 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 KMT5AQ9NQR1 393 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 TDP1Q9NUW8 608 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
RAD9A-207ENST00000542139 CCL26Q9Y258 94 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 GPSM3Q9Y4H4 160 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 ABCA7Q8IZY2 2146 aa16.49■□□□□ 0.23
RAD9A-207ENST00000542139 GCN1Q92616 2671 aaKnown RBP16.49■□□□□ 0.23
RAD9A-207ENST00000542139 LAMA5O15230 3695 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 XPOTO43592 962 aaKnown RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 ALDH1A2O94788 518 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 ZIC2O95409 532 aaPredicted RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 LARGE1O95461 756 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 ENGP17813 658 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 TYMPP19971 482 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 MCM7P33993 719 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 NPTX2P47972 431 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 SPAG1Q07617 926 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 STRN3Q13033 797 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 COL28A1Q2UY09 1125 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 SLC10A6Q3KNW5 377 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 SLC39A12Q504Y0 691 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 LMBRD2Q68DH5 695 aaPredicted RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 USP13Q92995 863 aaPredicted RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 TNFRSF25Q93038 417 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
RAD9A-207ENST00000542139 UBQLN1Q9UMX0 589 aaKnown RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 SETXQ7Z333 2677 aaKnown RBP16.48■□□□□ 0.23
RAD9A-207ENST00000542139 ASCC3Q8N3C0 2202 aaKnown RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 ITPR1Q14643 2758 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 PROZP22891 400 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 LRPAP1P30533 357 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 DPP6P42658 865 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 IFNAR2P48551 515 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 NR1H3Q13133 447 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 ZNF423Q2M1K9 1284 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 NAIF1Q69YI7 327 aaPredicted RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 ARMCX6Q7L4S7 300 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 SYT12Q8IV01 421 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 MRPS31Q92665 395 aaKnown RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 CNOT6LQ96LI5 555 aaKnown RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 GTPBP2Q9BX10 602 aaKnown RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 TMEM60Q9H2L4 133 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 IL21Q9HBE4 155 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 DUS2Q9NX74 493 aaKnown RBP16.47■□□□□ 0.23
RAD9A-207ENST00000542139 TBX20Q9UMR3 447 aa16.47■□□□□ 0.23
RAD9A-207ENST00000542139 FREM2Q5SZK8 3169 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 DTNBO60941 627 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 TOM1L1O75674 476 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 CFIP05156 583 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 CXCL8P10145 99 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 ATF6P18850 670 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 CYP3A5P20815 502 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 MUTP22033 750 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 CCT6AP40227 531 aaKnown RBP16.46■□□□□ 0.23
RAD9A-207ENST00000542139 AARSP49588 968 aaKnown RBP eCLIP16.46■□□□□ 0.23
RAD9A-207ENST00000542139 CDR1P51861 262 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 SEC13P55735 322 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 SCAPQ12770 1279 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 TRIM29Q14134 588 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 ATP2A3Q93084 1043 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 PLEKHA5Q9HAU0 1116 aa16.46■□□□□ 0.23
RAD9A-207ENST00000542139 SMG1Q96Q15 3661 aaKnown RBP16.46■□□□□ 0.23
RAD9A-207ENST00000542139 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 FAM221BA6H8Z2 402 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 UPK3BL1B0FP48 263 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 BTBD18B2RXH4 712 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 UPK3BL2E5RIL1 263 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 WNT7AO00755 349 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 TNFRSF10BO14763 440 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 NMT1P30419 496 aaKnown RBP16.45■□□□□ 0.22
RAD9A-207ENST00000542139 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 SEMA3BQ13214 749 aa16.45■□□□□ 0.22
RAD9A-207ENST00000542139 HNRNPDQ14103 355 aaKnown RBP16.45■□□□□ 0.22
RAD9A-207ENST00000542139 MTF1Q14872 753 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms