RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 NCOA4Q13772 614 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 SPOPLQ6IQ16 392 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 TTI2Q6NXR4 508 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 FAM171BQ6P995 826 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 ELMSAN1Q6PJG2 1045 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 DPH6Q7L8W6 267 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 ADGRF2Q8IZF7 708 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 GPT2Q8TD30 523 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 GPR152Q8TDT2 470 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 TAS1R2Q8TE23 839 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 SEMA4DQ92854 862 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 DHTKD1Q96HY7 919 aaPredicted RBP10.44□□□□□ -0.74
YBX3-212ENST00000542002 MMS19Q96T76 1030 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 ACBD6Q9BR61 282 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 CORO1BQ9BR76 489 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 PI4K2AQ9BTU6 479 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 RPP25Q9BUL9 199 aaKnown RBP10.44□□□□□ -0.74
YBX3-212ENST00000542002 SDCBP2Q9H190 292 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 VRTNQ9H8Y1 702 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 CRTAC1Q9NQ79 661 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 EPS15L1Q9UBC2 864 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
YBX3-212ENST00000542002 GTF3C4Q9UKN8 822 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 MAFFQ9ULX9 164 aa10.44□□□□□ -0.74
YBX3-212ENST00000542002 FAM86C2PA6NEL3 165 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 CETN3O15182 167 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 DCXO43602 365 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 PHACTR2O75167 634 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 XYLBO75191 536 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 PTPN2P17706 415 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 ATF6P18850 670 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 WARSP23381 471 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 CYP2F1P24903 491 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 ATICP31939 592 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 GBP2P32456 591 aaPredicted RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 GNL1P36915 607 aaPredicted RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 RAP1GAPP47736 663 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 AP3M2P53677 418 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 STX17P56962 302 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 PSMC1P62191 440 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 FKBP3Q00688 224 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 BIRC3Q13489 604 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 TRPC3Q13507 836 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 PABPC1LQ4VXU2 614 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 INTS6LQ5JSJ4 861 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 PRSS36Q5K4E3 855 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 KLHL10Q6JEL2 608 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 INTS8Q75QN2 995 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 GET4Q7L5D6 327 aaPredicted RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 OTOP3Q7RTS5 596 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 DNAJB7Q7Z6W7 309 aaPredicted RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 TDRD5Q8NAT2 981 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 NELFBQ8WX92 580 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 ING5Q8WYH8 240 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 FGF13Q92913 245 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 ZSWIM3Q96MP5 696 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 DPEP3Q9H4B8 488 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 SMYD3Q9H7B4 428 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 KCNK12Q9HB15 430 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 APOBEC3GQ9HC16 384 aaKnown RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 ZNF334Q9HCZ1 680 aaPredicted RBP10.43□□□□□ -0.74
YBX3-212ENST00000542002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.43□□□□□ -0.74
YBX3-212ENST00000542002 YIPF1Q9Y548 306 aa10.43□□□□□ -0.74
YBX3-212ENST00000542002 ANHXE9PGG2 379 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 TACC1O75410 805 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 ASS1P00966 412 aaKnown RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 HLA-DRAP01903 254 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 LRG1P02750 347 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 HAPLN1P10915 354 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 GJA1P17302 382 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 CEBPBP17676 345 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 LHX1P48742 406 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 ZXDAP98168 799 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 LRRC63Q05C16 580 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 ENPEPQ07075 957 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 PTPN21Q16825 1174 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 DDR2Q16832 855 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 SGSM1Q2NKQ1 1148 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 CBWD6Q4V339 395 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 CBWD3Q5JTY5 395 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 CBWD5Q5RIA9 395 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 SDHAF4Q5VUM1 108 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 PARM1Q6UWI2 310 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 TMC8Q8IU68 726 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 NPAS3Q8IXF0 933 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 DCP1BQ8IZD4 617 aaKnown RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 STKLD1Q8NE28 680 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 GIPC2Q8TF65 315 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 EDAQ92838 391 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 SYAP1Q96A49 352 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 ACSF2Q96CM8 615 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 ZNF512Q96ME7 567 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 MKNK1Q9BUB5 465 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 MMRN2Q9H8L6 949 aa10.42□□□□□ -0.74
YBX3-212ENST00000542002 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 ABI2Q9NYB9 513 aaPredicted RBP10.42□□□□□ -0.74
YBX3-212ENST00000542002 HSFX1Q9UBD0 423 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms