RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MAP3K21Q5TCX8 1036 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 FAM228AQ86W67 206 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 ZMAT2Q96NC0 199 aaKnown RBP16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 DPP3Q9NY33 737 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 KLK14Q9P0G3 267 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 GGA2Q9UJY4 613 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 AGAP1Q9UPQ3 857 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 NFS1Q9Y697 457 aa16.22■□□□□ 0.19
CLPTM1-202ENST00000541297 M0QZ92 97 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 LRIG3Q6UXM1 1119 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 CPA5Q8WXQ8 436 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 RFFLQ8WZ73 363 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 TAF4BQ92750 862 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 SLC40A1Q9NP59 571 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 BCCIPQ9P287 314 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 COG5Q9UP83 839 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 ATP8B3O60423 1300 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 GMNCA6NCL1 334 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 CHUKO15111 745 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 THAP12O43422 761 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 RECQL4O94761 1208 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 INHAP05111 366 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 NKX3-2P78367 333 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 RPS6KA1Q15418 735 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 QPCTQ16769 361 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 ZNF667Q5HYK9 610 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 DAAM2Q86T65 1068 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 ARFGAP2Q8N6H7 521 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 CXorf38Q8TB03 319 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 NEUROG2Q9H2A3 272 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 RNF39Q9H2S5 420 aa16.21■□□□□ 0.19
CLPTM1-202ENST00000541297 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 NCANO14594 1321 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 A0A0A6YYK5 440 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 GZMAP12544 262 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CTNNA1P35221 906 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 BPIFB4P59827 614 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF844Q08AG5 666 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 ORC1Q13415 861 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 PCBP1Q15365 356 aaKnown RBP eCLIP16.2■□□□□ 0.181e-13■■■■■ 45.8
CLPTM1-202ENST00000541297 IFI16Q16666 785 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SPRED3Q2MJR0 410 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 TWF2Q6IBS0 349 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CCDC121Q6ZUS5 278 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 APBB1IPQ7Z5R6 666 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SERINC5Q86VE9 423 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 UBR7Q8N806 425 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SNX27Q96L92 541 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 AP1M1Q9BXS5 423 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CTTNBP2NLQ9P2B4 639 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SLC12A6Q9UHW9 1150 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 C2CD2Q9Y426 696 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CEP104O60308 925 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CHRNA1P02708 482 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 THPOP40225 353 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CLEC16AQ2KHT3 1053 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 RNF180Q86T96 592 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 PCSK9Q8NBP7 692 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 C18orf25Q96B23 403 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 CCDC114Q96M63 670 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 OSBPL7Q9BZF2 842 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 SMYD3Q9H7B4 428 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 TRMT13Q9NUP7 481 aaKnown RBP16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 TUBGCP4Q9UGJ1 667 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 PARP2Q9UGN5 583 aa16.2■□□□□ 0.18
CLPTM1-202ENST00000541297 BUB1BO60566 1050 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 FKTNO75072 461 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 AXLP30530 894 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 FLT3P36888 993 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 GPC5P78333 572 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 POU5F1Q01860 360 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 UBXN11Q5T124 520 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 RSPH3Q86UC2 560 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 HPDLQ96IR7 371 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 CNTN6Q9UQ52 1028 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 TRPV2Q9Y5S1 764 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 DNM1LO00429 736 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 TRAPPC3O43617 180 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 CUL1Q13616 776 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 ODF2Q5BJF6 829 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF653Q96CK0 615 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-202ENST00000541297 MKI67P46013 3256 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 KIF4AO95239 1232 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 UNGP13051 313 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 CST5P28325 142 aaPredicted RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ZNF132P52740 706 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ACLYP53396 1101 aa16.18■□□□□ 0.18
CLPTM1-202ENST00000541297 ITGA7Q13683 1181 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms