RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 NUMBLQ9Y6R0 609 aa13.27□□□□□ -0.28
DDX55-206ENST00000539934 ABCB11O95342 1321 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ACSL4O60488 711 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 RHOBTB3O94955 611 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 PRCPP42785 496 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ANKRD20A2Q5SQ80 823 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ANKRD20A1Q5TYW2 823 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 ALS2CLQ60I27 953 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 PPFIBP2Q8ND30 876 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 MAFAQ8NHW3 353 aaPredicted RBP13.27□□□□□ -0.29
DDX55-206ENST00000539934 STARD8Q92502 1023 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 GFM2Q969S9 779 aaKnown RBP13.27□□□□□ -0.29
DDX55-206ENST00000539934 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.29
DDX55-206ENST00000539934 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 CCDC28BQ9BUN5 200 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 BLOC1S4Q9NUP1 217 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 FAIMQ9NVQ4 179 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 AIPL1Q9NZN9 384 aa13.27□□□□□ -0.29
DDX55-206ENST00000539934 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
DDX55-206ENST00000539934 HOXB1P14653 301 aaPredicted RBP13.26□□□□□ -0.29
DDX55-206ENST00000539934 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
DDX55-206ENST00000539934 LSP1P33241 339 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 CD83Q01151 205 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 TRAP1Q12931 704 aaKnown RBP13.26□□□□□ -0.29
DDX55-206ENST00000539934 ANO4Q32M45 955 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 NAA35Q5VZE5 725 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 SPATA2LQ8IUW3 424 aaPredicted RBP13.26□□□□□ -0.29
DDX55-206ENST00000539934 MAP7D3Q8IWC1 876 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 MDM1Q8TC05 714 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 RAD54LQ92698 747 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 CCDC127Q96BQ5 260 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 HAUS1Q96CS2 278 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 ANKZF1Q9H8Y5 726 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
DDX55-206ENST00000539934 FAM86B1E9PN63 330 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TBX3O15119 743 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 ZW10O43264 779 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 COBLO75128 1261 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TSPAN9O75954 239 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 FAM86B2P0C5J1 330 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX55-206ENST00000539934 TMOD1P28289 359 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 EVI2BP34910 448 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 CBX5P45973 191 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TUBP50607 506 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 USP14P54578 494 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 HERVK_113P62684 666 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 RELQ04864 619 aaPredicted RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 SHHQ15465 462 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TRIM65Q6PJ69 517 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 OR7G1Q8NGA0 311 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 INTS12Q96CB8 462 aaKnown RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 CIB1Q99828 191 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 NUF2Q9BZD4 464 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 FOXP3Q9BZS1 431 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 NT5C3AQ9H0P0 336 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 RASAL2Q9UJF2 1139 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 OR5K4A6NMS3 321 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 CHRNB1P11230 501 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
DDX55-206ENST00000539934 CIITAP33076 1130 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 PLTPP55058 493 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 STK11Q15831 433 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TTC23LQ6PF05 361 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 GPR142Q7Z601 462 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 ADSSL1Q8N142 457 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 ATL1Q8WXF7 558 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 TIPINQ9BVW5 301 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 MTMR12Q9C0I1 747 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 UBN1Q9NPG3 1134 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 LRRC42Q9Y546 428 aa13.25□□□□□ -0.29
DDX55-206ENST00000539934 CHD7Q9P2D1 2997 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 PSMA7O14818 248 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 MCF2LO15068 1137 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 ICAM1P05362 532 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CYP3A4P08684 503 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 RAB15P59190 212 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 MAPRE2Q15555 327 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 PTPN21Q16825 1174 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CDONQ4KMG0 1287 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CDKAL1Q5VV42 579 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CNNM4Q6P4Q7 775 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 DYMQ7RTS9 669 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 NOA1Q8NC60 698 aaKnown RBP13.24□□□□□ -0.29
DDX55-206ENST00000539934 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 LENG9Q96B70 501 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms