RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 AJAP1Q9UKB5 411 aaPredicted RBP2.58□□□□□ -2
CBX3P4-201ENST00000538909 CDYLQ9Y232 598 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 ACTL7AQ9Y615 435 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 SPAG9O60271 1321 aaKnown RBP2.58□□□□□ -2
CBX3P4-201ENST00000538909 ADGRA2Q96PE1 1338 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 SLIT1O75093 1534 aa2.58□□□□□ -2
CBX3P4-201ENST00000538909 CEP170BQ9Y4F5 1589 aaPredicted RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 PPLO60437 1756 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 WDR27A2RRH5 827 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 FAM90A10PA6NDY2 464 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 KIAA0391O15091 583 aaKnown RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 KPNA6O60684 536 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ALAS1P13196 640 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 TCF3P15923 654 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 MT3P25713 68 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 LSP1P33241 339 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 KPNA1P52294 538 aaPredicted RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 CDK17Q00537 523 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ERV3-1Q14264 604 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 SEMA3AQ14563 771 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 TRIP6Q15654 476 aaKnown RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 CT83Q5H943 113 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 OTUD7BQ6GQQ9 843 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 CEP85Q6P2H3 762 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ADGRG5Q8IZF4 528 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 SSH1Q8WYL5 1049 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 C5orf34Q96MH7 638 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 GPR101Q96P66 508 aaPredicted RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 CTAGE1Q96RT6 745 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 TLR10Q9BXR5 811 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 CHMP4AQ9BY43 222 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 WNT8AQ9H1J5 351 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 HIPK2Q9H2X6 1198 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 LANCL2Q9NS86 450 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 KLC4Q9NSK0 619 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 SNTG2Q9NY99 539 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 VSX1Q9NZR4 365 aaPredicted RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 FAM30AQ9NZY2 134 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 KCNG1Q9UIX4 513 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ICKQ9UPZ9 632 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.57□□□□□ -2
CBX3P4-201ENST00000538909 RAB3GAP2Q9H2M9 1393 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 ZFYVE9O95405 1425 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 SPATA31E1Q6ZUB1 1445 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 PRAG1Q86YV5 1406 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 SETD5Q9C0A6 1442 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 MED14O60244 1454 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 NRXN1Q9ULB1 1477 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 NEXMIFQ5QGS0 1516 aa2.57□□□□□ -2
CBX3P4-201ENST00000538909 POLR1AO95602 1720 aaPredicted RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 CFAP65Q6ZU64 1925 aaKnown RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 GTPBP1O00178 669 aaKnown RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 TOR1BO14657 336 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 RAB11FIP3O75154 756 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 DNAJB5O75953 348 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 JTBO76095 146 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 F2P00734 622 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 KCNA2P16389 499 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 NXPH1P58417 271 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 MC2RQ01718 297 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 RHDQ02161 417 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 DSG1Q02413 1049 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 ITIH3Q06033 890 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 TERF2Q15554 542 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 FNDC3BQ53EP0 1204 aaKnown RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 SHC4Q6S5L8 630 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 FRMD7Q6ZUT3 714 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 SEM1Q6ZVN7 128 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 GALNT16Q8N428 558 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 NSUN7Q8NE18 718 aaKnown RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 GPR156Q8NFN8 814 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 FBXO41Q8TF61 875 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 SNX19Q92543 992 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 REPS1Q96D71 796 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 PAWRQ96IZ0 340 aaKnown RBP2.56□□□□□ -2
CBX3P4-201ENST00000538909 PBKQ96KB5 322 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 POLR3GLQ9BT43 218 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 TRMOQ9BU70 441 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 DPP7Q9UHL4 492 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 ANKRD30BQ9BXX2 1392 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 A2ML1A8K2U0 1454 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 NLRP1Q9C000 1473 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 NWD1Q149M9 1564 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 STRCP1A6NGW2 1772 aa2.56□□□□□ -2
CBX3P4-201ENST00000538909 CYP2D7A0A087X1C5 515 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 CD8B2A6NJW9 211 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 KIF1BO60333 1816 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 HMGB1P09429 215 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 TSPY4P0CV99 314 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 TSPY10P0CW01 314 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 GSPT1P15170 499 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 NDUFB7P17568 137 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 PCSK1P29120 753 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 GUCY1A2P33402 732 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 NEK4P51957 841 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 PHC1P78364 1004 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 DYRK1AQ13627 763 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 DAZAP2Q15038 168 aaPredicted RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 C2orf27AQ580R0 203 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms