RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 SPATA31A7Q8IWB4 1347 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 DOT1LQ8TEK3 1739 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 SMIM31A0A1B0GVY4 71 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 POC1B-GALNT4F8VUJ3 575 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 EML1O00423 815 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ATP2A1O14983 1001 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PABPC4LP0CB38 370 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 KCNA2P16389 499 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 ATP2B4P23634 1241 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CYP2J2P51589 502 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CDK16Q00536 496 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PTP4A2Q12974 167 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 HIC1Q14526 733 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 Q4G0T1 1027 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 KIAA0825Q8IV33 1275 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 CELF1Q92879 486 aaKnown RBP9.5□□□□□ -0.89
SNHG1-209ENST00000538654 HIC2Q96JB3 615 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PARVGQ9HBI0 331 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
SNHG1-209ENST00000538654 PPP1R11O60927 126 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 RARBP10826 455 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 PLS3P13797 630 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 GCAP28676 217 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 VPS41P49754 854 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 RTP1P59025 263 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 MYBPC3Q14896 1274 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 IZUMO2Q6UXV1 221 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 TMPRSS6Q8IU80 811 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 C4orf33Q8N1A6 199 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ATG4AQ8WYN0 398 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 SKA1Q96BD8 255 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 TBC1D20Q96BZ9 403 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 FNBP1Q96RU3 617 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 BRINP2Q9C0B6 783 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 TAS2R1Q9NYW7 299 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 DCTN4Q9UJW0 460 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 TBC1D30Q9Y2I9 924 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 A0A0G2JND7 137 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ZSCAN9O15535 394 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 PRMT3O60678 531 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ZCCHC18P0CG32 403 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 CCDC166P0CW27 439 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ANPEPP15144 967 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 MAPK4P31152 587 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 SFSWAPQ12872 951 aaKnown RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ITGA9Q13797 1035 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ACBD5Q5T8D3 534 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 RINT1Q6NUQ1 792 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 FAM71AQ8IYT1 594 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 WDR60Q8WVS4 1066 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 RNF34Q969K3 372 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 PPP1R14BQ96C90 147 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 BTBD6Q96KE9 485 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 PLEKHG4BQ96PX9 1271 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 TUBGCP5Q96RT8 1024 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 SUDS3Q9H7L9 328 aaPredicted RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 MANSC1Q9H8J5 431 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 DNAAF2Q9NVR5 837 aaKnown RBP9.49□□□□□ -0.89
SNHG1-209ENST00000538654 GALNT8Q9NY28 637 aa9.49□□□□□ -0.89
SNHG1-209ENST00000538654 FKBP6O75344 327 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 DESP17661 470 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 NMT1P30419 496 aaKnown RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 RPL26P61254 145 aaKnown RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 XIAPP98170 497 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 HNRNPDQ14103 355 aaKnown RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 RASA3Q14644 834 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 MAPK6Q16659 721 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ZC2HC1CQ53FD0 456 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PRR16Q569H4 304 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PLEKHG4Q58EX7 1191 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PCNX4Q63HM2 1172 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 GSTA5Q7RTV2 222 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 FAM178BQ8IXR5 827 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 KBTBD2Q8IY47 623 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PWWP2AQ96N64 755 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 TSSK1BQ9BXA7 367 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 EPB41L1Q9H4G0 881 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 UBAP1LF5GYI3 381 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 ATP9BO43861 1147 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 TMCC1O94876 653 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 SGPL1O95470 568 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 IL1BP01584 269 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PIM1P11309 404 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-209ENST00000538654 KRT4P19013 534 aa9.48□□□□□ -0.89
SNHG1-209ENST00000538654 PHBP35232 272 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms