RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MIF4GDA9UHW6 222 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 RFC1P35251 1148 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 RWDD2BP57060 319 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 RBP5P82980 135 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 KCNA10Q16322 511 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 SMTNL2Q2TAL5 461 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 SEL1L2Q5TEA6 688 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 DCUN1D2Q6PH85 259 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 SMG8Q8ND04 991 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 FEZF2Q8TBJ5 459 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 MAGOHBQ96A72 148 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 R3HDM2Q9Y2K5 976 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 C2CD2Q9Y426 696 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 KRT10P13645 584 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 GGCXP38435 758 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 MFSD14CQ5VZR4 134 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 KAZNQ674X7 775 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 DNAJC24Q6P3W2 148 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 SLC13A5Q86YT5 568 aaPredicted RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 IFT20Q8IY31 132 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
ACTN1-205ENST00000538545 XPNPEP3Q9NQH7 507 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 CHST7Q9NS84 486 aa14.97□□□□□ -0.01
ACTN1-205ENST00000538545 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 AGPSO00116 658 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 GRIN2DO15399 1336 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 PROSCO94903 275 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 CHRNA1P02708 482 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 LMO2P25791 158 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 SIX1Q15475 284 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-205ENST00000538545 TRIP13Q15645 432 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-205ENST00000538545 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 KCNT1Q5JUK3 1230 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 PPP1R26Q5T8A7 1209 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-205ENST00000538545 TRIM72Q6ZMU5 477 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 CD99L2Q8TCZ2 262 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 CALR3Q96L12 384 aaKnown RBP14.96□□□□□ -0.01
ACTN1-205ENST00000538545 CAPNS2Q96L46 248 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 AGO3Q9H9G7 860 aaKnown RBP14.96□□□□□ -0.01
ACTN1-205ENST00000538545 GTF2IRD1Q9UHL9 959 aa14.96□□□□□ -0.01
ACTN1-205ENST00000538545 TCRBV5S1A1TA0A578 114 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 RARBP10826 455 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 RALAP11233 206 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.02
ACTN1-205ENST00000538545 MAP9Q49MG5 647 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 SH3PXD2AQ5TCZ1 1133 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 RNF169Q8NCN4 708 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 UBXN6Q9BZV1 441 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 SYNCQ9H7C4 482 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 TRMT13Q9NUP7 481 aaKnown RBP14.96□□□□□ -0.02
ACTN1-205ENST00000538545 PARVAQ9NVD7 372 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 TSPAN16Q9UKR8 245 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 ITGA11Q9UKX5 1188 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 SNX24Q9Y343 169 aa14.96□□□□□ -0.02
ACTN1-205ENST00000538545 RABGGTBP53611 331 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 GJA9P57773 515 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 PSMC1P62191 440 aaKnown RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 DR1Q01658 176 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 TAF5Q15542 800 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 ZBTB6Q15916 424 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 GLE1Q53GS7 698 aaKnown RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 OR6B3Q8NGW1 331 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 KATNAL1Q9BW62 490 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 ST3GAL5Q9UNP4 418 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 FAN1Q9Y2M0 1017 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 TMEM191CA6NGB0 347 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 SEPT4O43236 478 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 ADAMTS4O75173 837 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 MYBL1P10243 752 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 FGFR1P11362 822 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 CRYBB1P53674 252 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 SOWAHAQ2M3V2 549 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 UBAP2Q5T6F2 1119 aaKnown RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 CCDC137Q6PK04 289 aaKnown RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 ALKAL1Q6UXT8 129 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
ACTN1-205ENST00000538545 MTG1Q9BT17 334 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 TTC7AQ9ULT0 858 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-205ENST00000538545 CCDC188H7C350 402 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 SYF2O95926 243 aaKnown RBP14.94□□□□□ -0.02
ACTN1-205ENST00000538545 MCM3P25205 808 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 CTNNA2P26232 953 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 EPHB4P54760 987 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 SP3Q02447 781 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 MRPL47Q9HD33 250 aaKnown RBP14.94□□□□□ -0.02
ACTN1-205ENST00000538545 VPS18Q9P253 973 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 BARX2Q9UMQ3 279 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-205ENST00000538545 PCDHGC3Q9UN70 934 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
ACTN1-205ENST00000538545 ATP8B1O43520 1251 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 TUBBP07437 444 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 GHRP10912 638 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 THPOP40225 353 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 MLH1P40692 756 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 GPD2P43304 727 aa14.94□□□□□ -0.02
ACTN1-205ENST00000538545 VPS41P49754 854 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms