RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 EIF3CLB5ME19 914 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 H7C4K7 107 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SPTLC1O15269 473 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 LPXNO60711 386 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CILPO75339 1184 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GALTP07902 379 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 MMEP08473 750 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ACO1P21399 889 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 WARSP23381 471 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SSTR3P32745 418 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SNX16P57768 344 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CDR2Q01850 454 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GFPT1Q06210 699 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DSC1Q08554 894 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 STILQ15468 1287 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NAB2Q15742 525 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ARHGAP29Q52LW3 1261 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 C10orf76Q5T2E6 689 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PPP1R2P3Q6NXS1 205 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 WDR59Q6PJI9 974 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TRIM72Q6ZMU5 477 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 C16orf59Q7L2K0 433 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZNF571Q7Z3V5 609 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZSCAN30Q86W11 494 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 GLYCTKQ8IVS8 523 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 HERC6Q8IVU3 1022 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 PDCL2Q8N4E4 241 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SUSD3Q96L08 255 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 EIF3CQ99613 913 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 RAD9AQ99638 391 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DESI2Q9BSY9 194 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SDCBP2Q9H190 292 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 KCNF1Q9H3M0 494 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 L1RE1Q9UN81 338 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 DNAH12Q6ZR08 3092 aa11.34□□□□□ -0.59
TNFRSF1A-211ENST00000538363 FAM170AA1A519 330 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GOLGA6L9A6NEM1 432 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CALCAP01258 141 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 H2AFZP0C0S5 128 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TYMPP19971 482 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ACAT1P24752 427 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ADORA2BP29275 332 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PPM1AP35813 382 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NSFP46459 744 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RAD23BP54727 409 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 EPHB4P54760 987 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ARPP19P56211 112 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KIF5AQ12840 1032 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MTF1Q14872 753 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC18A3Q16572 532 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LIN9Q5TKA1 542 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ALKBH5Q6P6C2 394 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 H2AFVQ71UI9 128 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NOP9Q86U38 636 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DCP1BQ8IZD4 617 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TMEM35BQ8NCS4 154 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SYT15Q9BQS2 421 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ELOVL4Q9GZR5 314 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FAM49BQ9NUQ9 324 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CDH9Q9ULB4 789 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PYCARDQ9ULZ3 195 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PCDHA13Q9Y5I0 950 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GBF1Q92538 1859 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TNRC18O15417 2968 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SCN1AP35498 2009 aa11.33□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TMEM189-UBE2V1I3L0A0 370 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 M0QYV0 167 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SYN3O14994 580 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KRT86O43790 486 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GJB5O95377 273 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PBX3P40426 434 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 INCA1Q0VD86 236 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GOLGA7BQ2TAP0 167 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MDH1BQ5I0G3 518 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 E4F1Q66K89 784 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TOGARAM2Q6ZUX3 1019 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms