RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TBC1D19Q8N5T2 526 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SNX31Q8N9S9 440 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 UCMAQ8WVF2 138 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 KIF2CQ99661 725 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CIPCQ9C0C6 399 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 RAB6BQ9NRW1 208 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 TSPAN3O60637 253 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 LGALS2P05162 132 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 HSPA8P11142 646 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 EPHB2P29323 1055 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 TYK2P29597 1187 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 LHX1P48742 406 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 EIF3BP55884 814 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 IFT88Q13099 833 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 POLD3Q15054 466 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 PTRHD1Q6GMV3 140 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 ACAD11Q709F0 780 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RIOX2Q8IUF8 465 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 C4orf19Q8IY42 314 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CYFIP2Q96F07 1278 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 DEFB118Q96PH6 123 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CGRRF1Q99675 332 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ATXN3LQ9H3M9 355 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 IFT172Q9UG01 1749 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ZNF185O15231 689 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 LZTS3O60299 673 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 HIST1H2AGP0C0S8 130 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 TGFB3P10600 412 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RALBP11234 206 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PRKAR2AP13861 404 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 GFAPP14136 432 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 HIST1H2ADP20671 130 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RAB27AP51159 221 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PSMC6P62333 389 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PHEXP78562 749 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 HIF1AQ16665 826 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ACBD5Q5T8D3 534 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 MEI1Q5TIA1 1274 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PHLDB3Q6NSJ2 640 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ANKS3Q6ZW76 656 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 HERC6Q8IVU3 1022 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 HIST1H2AHQ96KK5 128 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 HIST1H2AJQ99878 128 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ADAM2Q99965 735 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CENPKQ9BS16 269 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 H2AFJQ9BTM1 129 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.61□□□□□ -1.51
LRP6-203ENST00000538239 PKP3Q9Y446 797 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MROH1Q8NDA8 1641 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 GRID2IPA4D2P6 1211 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RNASEH1O60930 286 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 MMEP08473 750 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ELNP15502 786 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CCDC15Q0P6D6 951 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SPARCL1Q14515 664 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RABGAP1LQ5R372 815 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MOXD1Q6UVY6 613 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 C11orf96Q7Z7L8 435 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 FEZF2Q8TBJ5 459 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PTPRN2Q92932 1015 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ARHGEF26Q96DR7 871 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 VCX3AQ9NNX9 186 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 UVRAGQ9P2Y5 699 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MRPL42Q9Y6G3 142 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 KCNA2P16389 499 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SLC18A3Q16572 532 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CD99L2Q8TCZ2 262 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 TEKT4Q8WW24 435 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ZCWPW1Q9H0M4 648 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 RANBP17Q9H2T7 1088 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 CNOT10Q9H9A5 744 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 LATS2Q9NRM7 1088 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 L3MBTL1Q9Y468 752 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CASZ1Q86V15 1759 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 COL3A1P02461 1466 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 FAM86B1E9PN63 330 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 ZNF197O14709 1029 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 FAM86B2P0C5J1 330 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 NR1D1P20393 614 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 CTNNB1P35222 781 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MYL6P60660 151 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MAP2K5Q13163 448 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PLD1Q13393 1074 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 MTM1Q13496 603 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 PDK1Q15118 436 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 GLE1Q53GS7 698 aaKnown RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 KLHDC7AQ5VTJ3 777 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 OVOS1Q6IE37 1185 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 C20orf96Q9NUD7 363 aaPredicted RBP5.61□□□□□ -1.51
LRP6-203ENST00000538239 ZFATQ9P243 1243 aa5.61□□□□□ -1.51
LRP6-203ENST00000538239 SPDYAQ5MJ70 313 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 ALS2CLQ60I27 953 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 CSGALNACT1Q8TDX6 532 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TRAIPQ9BWF2 469 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 TRIM10Q9UDY6 481 aa5.6□□□□□ -1.51
LRP6-203ENST00000538239 AMACRQ9UHK6 382 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms