RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 MTHFD1LQ6UB35 978 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 CCDC89Q8N998 374 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 CCDC114Q96M63 670 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 SCLT1Q96NL6 688 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 TRAIPQ9BWF2 469 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 CYP3A43Q9HB55 503 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
SLC28A1-204ENST00000538177 SIGLEC16A6NMB1 481 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 VTNP04004 478 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 HOXD8P13378 290 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 CD19P15391 556 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 ADCY8P40145 1251 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 RAP1GAPP47736 663 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 GTF2A2P52657 109 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 ITGA8P53708 1063 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 CDH8P55286 799 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 GSCP56915 257 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 LMNB2Q03252 620 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 SKIDA1Q1XH10 827 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 TNFAIP8L3Q5GJ75 292 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 CYP4A22Q5TCH4 519 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 MFSD7Q6UXD7 560 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 NLRP14Q86W24 1093 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 BBOF1Q8ND07 529 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 ROPN1BQ9BZX4 212 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 ROPN1Q9HAT0 212 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 DDX56Q9NY93 547 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 CYTH4Q9UIA0 394 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 ANAPC5Q9UJX4 755 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 MGAMO43451 1857 aa12.07□□□□□ -0.48
SLC28A1-204ENST00000538177 IQCA1LA6NCM1 817 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 PI4K2BG5E9Z4 385 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 H3BRB1 525 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 MYO1CO00159 1063 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 RGS16O15492 202 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CILPO75339 1184 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TJP3O95049 919 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 AGTP01019 485 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 KRT1P04264 644 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ITGB3P05106 788 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 KLRC2P26717 231 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CHKAP35790 457 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 SEC24CP53992 1094 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TRIP13Q15645 432 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 MFSD5Q6N075 450 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 SPOCD1Q6ZMY3 1216 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ANKRD23Q86SG2 305 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 MYCBPAPQ8TBZ2 947 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 FNIP1Q8TF40 1166 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 BRI3BPQ8WY22 251 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CPB2Q96IY4 423 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CCT8L2Q96SF2 557 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ELOVL4Q9GZR5 314 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CDC42EP4Q9H3Q1 356 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TUT1Q9H6E5 874 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 SMYD3Q9H7B4 428 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 WDR35Q9P2L0 1181 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ZSWIM8A7E2V4 1837 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TLDC2A0PJX2 215 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 RASGRF2O14827 1237 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TRAPPC3O43617 180 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 LIASO43766 372 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 FAM107AO95990 144 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 KRT10P13645 584 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 RFC1P35251 1148 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 MMP13P45452 471 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 PTPN11Q06124 597 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CCL15Q16663 113 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TXNRD3NBQ6F5E7 133 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 B4GALNT4Q76KP1 1039 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 CENPTQ96BT3 561 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TMEM176AQ96HP8 235 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 TWNKQ96RR1 684 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 KLHL11Q9NVR0 708 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 DRG1Q9Y295 367 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 C2CD2Q9Y426 696 aa12.06□□□□□ -0.48
SLC28A1-204ENST00000538177 hCG_1818297A0A087WSY0 165 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 A0A1B0GUA9 196 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 GMNCA6NCL1 334 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 TSPAN1O60635 241 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 STAU1O95793 577 aaKnown RBP12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 TTC4O95801 387 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 KRT3P12035 628 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 P4HA1P13674 534 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 CDKN2BP42772 138 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 CDR1P51861 262 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 CORO7P57737 925 aa12.05□□□□□ -0.48
SLC28A1-204ENST00000538177 AUHQ13825 339 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms