RNA–Protein interactions for RNA: ENST00000535459.5

SOD2-208, Transcript of superoxide dismutase 2, humanhuman

TSL 2

Gene SOD2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-208ENST00000535459 KIAA1468Q9P260 1216 aa13.18□□□□□ -0.3
SOD2-208ENST00000535459 HOOK1Q9UJC3 728 aaKnown RBP13.18□□□□□ -0.3
SOD2-208ENST00000535459 YIPF1Q9Y548 306 aa13.18□□□□□ -0.3
SOD2-208ENST00000535459 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
SOD2-208ENST00000535459 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
SOD2-208ENST00000535459 MYBPHLA2RUH7 354 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 GABRDO14764 452 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 CLSTN1O94985 981 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 RHOP08100 348 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 CCNE1P24864 410 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 MYO1EQ12965 1108 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 ORC1Q13415 861 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 TRPC3Q13507 836 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 NCOA4Q13772 614 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 MYBPC2Q14324 1141 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 ZACNQ401N2 412 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 TTI2Q6NXR4 508 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 GIPC2Q8TF65 315 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 SEMA4DQ92854 862 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 RPP25Q9BUL9 199 aaKnown RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 APOBEC3GQ9HC16 384 aaKnown RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 CRTAC1Q9NQ79 661 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
SOD2-208ENST00000535459 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 DSEQ9UL01 958 aa13.17□□□□□ -0.3
SOD2-208ENST00000535459 CETN3O15182 167 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 MOSPD3O75425 235 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 C1RP00736 705 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 LRG1P02750 347 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 HNRNPA1P09651 372 aaKnown RBP eCLIP13.16□□□□□ -0.3
SOD2-208ENST00000535459 CEBPBP17676 345 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 ATF6P18850 670 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 FSHRP23945 695 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 CYP2F1P24903 491 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 CBWD6Q4V339 395 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 CBWD3Q5JTY5 395 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 CBWD5Q5RIA9 395 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 THEM5Q8N1Q8 247 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
SOD2-208ENST00000535459 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
SOD2-208ENST00000535459 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
SOD2-208ENST00000535459 R3HCC1Q9Y3T6 440 aaKnown RBP13.16□□□□□ -0.3
SOD2-208ENST00000535459 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 MAPK13O15264 365 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 NARSO43776 548 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 MYL4P12829 197 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 KRT13P13646 458 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 WARSP23381 471 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 HOXA9P31269 272 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 MTMR3Q13615 1198 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 PABPC1LQ4VXU2 614 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 INTS6LQ5JSJ4 861 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 ELMSAN1Q6PJG2 1045 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 OR6B3Q8NGW1 331 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 FGF13Q92913 245 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 MCRS1Q96EZ8 462 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 DHTKD1Q96HY7 919 aaPredicted RBP13.15□□□□□ -0.3
SOD2-208ENST00000535459 ZSWIM3Q96MP5 696 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 TSG101Q99816 390 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 SYT15Q9BQS2 421 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 LRRC3Q9BY71 257 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 TMEM30AQ9NV96 361 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
SOD2-208ENST00000535459 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
SOD2-208ENST00000535459 CLDN5O00501 218 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 PSMA7O14818 248 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 XYLBO75191 536 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 EPB41P11171 864 aaKnown RBP13.14□□□□□ -0.31
SOD2-208ENST00000535459 PTPN2P17706 415 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 GNL1P36915 607 aaPredicted RBP13.14□□□□□ -0.31
SOD2-208ENST00000535459 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 TNNC1P63316 161 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
SOD2-208ENST00000535459 DDR2Q16832 855 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 MDH1BQ5I0G3 518 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 PRSS36Q5K4E3 855 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 STXBP5Q5T5C0 1151 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 TCERG1LQ5VWI1 586 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 PARM1Q6UWI2 310 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 TMEM86AQ8N2M4 240 aa13.14□□□□□ -0.31
SOD2-208ENST00000535459 TATDN2Q93075 761 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms