RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-206ENST00000535290 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 PCDHA4Q9UN74 947 aa9.07□□□□□ -0.96
CLIP1-206ENST00000535290 TIMM13Q9Y5L4 95 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-206ENST00000535290 TRABD2BA6NFA1 517 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 USO1O60763 962 aaKnown RBP9.06□□□□□ -0.96
CLIP1-206ENST00000535290 GJB3O75712 270 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 OAZ2O95190 189 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 LYPLA2O95372 231 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 SERPINF2P08697 491 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ITPKBP27987 946 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 MCM4P33991 863 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ABCG1P45844 678 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 CDR1P51861 262 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 SEC13P55735 322 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
CLIP1-206ENST00000535290 GPR17Q13304 367 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 NPY5RQ15761 445 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 CRY1Q16526 586 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 DUOXA1Q1HG43 343 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ADCK5Q3MIX3 580 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 DCAF4L1Q3SXM0 396 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-206ENST00000535290 NT5DC1Q5TFE4 455 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 TMEM92Q6UXU6 159 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 TMPRSS7Q7RTY8 843 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 TMEM130Q8N3G9 435 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 DEFB119Q8N690 84 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 PIGOQ8TEQ8 1089 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 HSD17B14Q9BPX1 270 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 LPIN3Q9BQK8 851 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 SLC26A6Q9BXS9 759 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ECT2Q9H8V3 914 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ANKEF1Q9NU02 776 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 SLC38A7Q9NVC3 462 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 DNAAF2Q9NVR5 837 aaKnown RBP9.06□□□□□ -0.96
CLIP1-206ENST00000535290 ASB3Q9Y575 518 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 PCDHB9Q9Y5E1 797 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-206ENST00000535290 PTPN13Q12923 2485 aa9.06□□□□□ -0.96
CLIP1-206ENST00000535290 KNTC1P50748 2209 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 MTMR11A4FU01 709 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 PYCARD-AS1I3L0S3 204 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 K7EQS6 105 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 CBFA2T3O75081 653 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 FGF19O95750 216 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 MARCKSP29966 332 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 RPL9P32969 192 aaKnown RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 HOXD12P35452 270 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 OSTNP61366 133 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 PPP4R3AQ6IN85 833 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 CC2D1AQ6P1N0 951 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 TMEM150AQ86TG1 271 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 BLIDQ8IZY5 108 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 CEP76Q8TAP6 659 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 EIF2AK1Q9BQI3 630 aaKnown RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 KIFC3Q9BVG8 833 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 RNF26Q9BY78 433 aaPredicted RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 PRORYQ9H606 182 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 SH3GLB2Q9NR46 395 aa9.05□□□□□ -0.96
CLIP1-206ENST00000535290 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
CLIP1-206ENST00000535290 SHROOM3Q8TF72 1996 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 MARCH6O60337 910 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 LARGE1O95461 756 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 CPA1P15085 419 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 KCNE1P15382 129 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 CDC25CP30307 473 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 NMT1P30419 496 aaKnown RBP9.04□□□□□ -0.96
CLIP1-206ENST00000535290 AVPR1AP37288 418 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 DPP6P42658 865 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 YWHAHQ04917 246 aaPredicted RBP9.04□□□□□ -0.96
CLIP1-206ENST00000535290 BFSP1Q12934 665 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 SLC14A1Q13336 389 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 CAMK2BQ13554 666 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 PDGFRLQ15198 375 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 SPDYCQ5MJ68 293 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 ATF7IP2Q5U623 682 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 PCSK4Q6UW60 755 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 NAXDQ8IW45 347 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 CPA6Q8N4T0 437 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 MAB21L3Q8N8X9 362 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 LSM14AQ8ND56 463 aaKnown RBP9.04□□□□□ -0.96
CLIP1-206ENST00000535290 WHAMMQ8TF30 809 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 SPACA7Q96KW9 195 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 C2orf40Q9H1Z8 148 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 CLMPQ9H6B4 373 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 TDP1Q9NUW8 608 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
CLIP1-206ENST00000535290 COL6A6A6NMZ7 2263 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 FAM149AA5PLN7 773 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 M0QZQ0 153 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 CCNT1O60563 726 aaKnown RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 ALDH1A2O94788 518 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 ATF6P18850 670 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 GRM5P41594 1212 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms