RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 POSTNQ15063 836 aa18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 WSCD1Q658N2 575 aa18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 TXNDC11Q6PKC3 985 aa18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 SPPL2BQ8TCT7 592 aa18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 PARD6AQ9NPB6 346 aa18.22■□□□□ 0.51
CAPRIN1-216ENST00000534042 CHURC1-FNTBB4DL54 471 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 PRAMEF12O95522 483 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 FNTBP49356 437 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 SPEM2Q0P670 501 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 SIM2Q14190 667 aaPredicted RBP18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 PON2Q15165 354 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 DYMQ7RTS9 669 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 ZNF720Q7Z2F6 126 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 LRRTM3Q86VH5 581 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 SFR1Q86XK3 245 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 DCP1BQ8IZD4 617 aaKnown RBP18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 GIPC2Q8TF65 315 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 HVCN1Q96D96 273 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 THG1LQ9NWX6 298 aaKnown RBP18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 ABI2Q9NYB9 513 aaPredicted RBP18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 ZMYM5Q9UJ78 669 aa18.21■□□□□ 0.51
CAPRIN1-216ENST00000534042 SPAG17Q6Q759 2223 aa18.21■□□□□ 0.5
CAPRIN1-216ENST00000534042 KPNA7A9QM74 516 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 IL18RAPO95256 599 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 PAPSS2O95340 614 aaPredicted RBP18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 RETP07949 1114 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 HAPLN1P10915 354 aaPredicted RBP18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 CNR2P34972 360 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 DMWDQ09019 674 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 ITPRIPL2Q3MIP1 535 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 SV2CQ496J9 727 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 WDR44Q5JSH3 913 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 HEATR6Q6AI08 1181 aaKnown RBP18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 CRELD2Q6UXH1 353 aaPredicted RBP18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 Q6ZS52 159 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 NT5DC4Q86YG4 428 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 EPSTI1Q96J88 318 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 ZNF560Q96MR9 790 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 RTKNQ9BST9 563 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 SLC46A2Q9BY10 475 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 CCDC39Q9UFE4 941 aa18.2■□□□□ 0.5
CAPRIN1-216ENST00000534042 K7ESF4 209 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 HRO43593 1189 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 TNK2Q07912 1038 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 PTPAQ15257 358 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 USP49Q70CQ1 688 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 LONP2Q86WA8 852 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 CMTM8Q8IZV2 173 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 SMG9Q9H0W8 520 aaKnown RBP18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 IKZF4Q9H2S9 585 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 MRPL44Q9H9J2 332 aaKnown RBP18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 SEL1LQ9UBV2 794 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 EXOC7Q9UPT5 735 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 PCDHB5Q9Y5E4 795 aa18.19■□□□□ 0.5
CAPRIN1-216ENST00000534042 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 LRP3O75074 770 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 PPP1R37O75864 691 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 GAP43P17677 238 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 ADSSP30520 456 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 PNPLA4P41247 253 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 TSPY1Q01534 308 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 SRSF5Q13243 272 aaKnown RBP18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 SYNPOQ8N3V7 929 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 GKN1Q9NS71 199 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 CLIC4Q9Y696 253 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 CACNA1BQ00975 2339 aa18.18■□□□□ 0.5
CAPRIN1-216ENST00000534042 DCDC2BA2VCK2 349 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 DDX6P26196 483 aaKnown RBP eCLIP18.17■□□□□ 0.52e-6■■■■□ 20
CAPRIN1-216ENST00000534042 AVPR1AP37288 418 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 NLRP12P59046 1061 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 CCINQ13939 588 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 RRAGBQ5VZM2 374 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 CEP68Q76N32 757 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 SV2BQ7L1I2 683 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 MAB21L3Q8N8X9 362 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 ACCSQ96QU6 501 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 STRA6Q9BX79 667 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 C2orf42Q9NWW7 574 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 TBC1D7Q9P0N9 293 aa18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 CNOT1A5YKK6 2376 aaKnown RBP18.17■□□□□ 0.5
CAPRIN1-216ENST00000534042 F11P03951 625 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 CSH1P0DML2 217 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 CSH2P0DML3 217 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 HMGA1P17096 107 aaKnown RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 POLR2BP30876 1174 aaKnown RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 HOXA6P31267 233 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 TXLNAP40222 546 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms