RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 ITGA11Q9UKX5 1188 aa18.9■□□□□ 0.62
CAPN5-207ENST00000533889 TSC2P49815 1807 aa18.9■□□□□ 0.62
CAPN5-207ENST00000533889 PTPRZ1P23471 2315 aaPredicted RBP18.9■□□□□ 0.62
CAPN5-207ENST00000533889 DPYSL4O14531 572 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 KIAA0391O15091 583 aaKnown RBP18.89■□□□□ 0.61
CAPN5-207ENST00000533889 TMEM191BP0C7N4 346 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 ME1P48163 572 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 RBP5P82980 135 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 GPR158Q5T848 1215 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 GAREM2Q75VX8 874 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 PDCL2Q8N4E4 241 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 SPRYD3Q8NCJ5 442 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 FAM84AQ96KN4 292 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 GCNAQ96QF7 691 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 TRPV5Q9NQA5 729 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 NDRG2Q9UN36 371 aaKnown RBP18.89■□□□□ 0.61
CAPN5-207ENST00000533889 PCDHB5Q9Y5E4 795 aa18.89■□□□□ 0.61
CAPN5-207ENST00000533889 CFAP54Q96N23 3096 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 ZNF233A6NK53 670 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 POLR2DO15514 142 aaKnown RBP18.88■□□□□ 0.61
CAPN5-207ENST00000533889 F13A1P00488 732 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 HAPLN1P10915 354 aaPredicted RBP18.88■□□□□ 0.61
CAPN5-207ENST00000533889 ATF6P18850 670 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 LRRC52Q8N7C0 313 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 CSGALNACT1Q8TDX6 532 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 CLDN23Q96B33 292 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 RSPRY1Q96DX4 576 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 ANKRD36BP1Q96IX9 119 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 MTMR12Q9C0I1 747 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 FAM13BQ9NYF5 915 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 L1RE1Q9UN81 338 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 SNX9Q9Y5X1 595 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 PIAS3Q9Y6X2 628 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 CACNA1IQ9P0X4 2223 aa18.88■□□□□ 0.61
CAPN5-207ENST00000533889 RIF1Q5UIP0 2472 aaKnown RBP18.88■□□□□ 0.61
CAPN5-207ENST00000533889 DMDP11532 3685 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 PRPF40AO75400 957 aaKnown RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 LMNAP02545 664 aaKnown RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 CDC25CP30307 473 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 RPS9P46781 194 aaKnown RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 MYL7Q01449 175 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 CSTF1Q05048 431 aaKnown RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 SURF1Q15526 300 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 NFE2Q16621 373 aaPredicted RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 FAM26FQ5R3K3 315 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 LMBRD2Q68DH5 695 aaPredicted RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 SCARA3Q6AZY7 606 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 MAML2Q8IZL2 1156 aaPredicted RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 TMEM86AQ8N2M4 240 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 FAM3CQ92520 227 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 C7orf25Q9BPX7 421 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 PI4K2AQ9BTU6 479 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 INTS13Q9NVM9 706 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 DDX43Q9NXZ2 648 aaKnown RBP18.87■□□□□ 0.61
CAPN5-207ENST00000533889 HSPBP1Q9NZL4 362 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 FBXO4Q9UKT5 387 aa18.87■□□□□ 0.61
CAPN5-207ENST00000533889 NCANO14594 1321 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.86■□□□□ 0.61
CAPN5-207ENST00000533889 SHISA7A6NL88 538 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 CHADO15335 359 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN5-207ENST00000533889 TNNC2P02585 160 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 ACAT1P24752 427 aaKnown RBP18.86■□□□□ 0.61
CAPN5-207ENST00000533889 HOXD13P35453 343 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 KPNA1P52294 538 aaPredicted RBP18.86■□□□□ 0.61
CAPN5-207ENST00000533889 CYP4F8P98187 520 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 MYO1EQ12965 1108 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 DUOXA2Q1HG44 320 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 CNNM4Q6P4Q7 775 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 CBWD2Q8IUF1 395 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 ZNF507Q8TCN5 953 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 ACBD6Q9BR61 282 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 MKNK1Q9BUB5 465 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 TASP1Q9H6P5 420 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 MAGEF1Q9HAY2 307 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 KIAA1586Q9HCI6 787 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 TMLHEQ9NVH6 421 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 GDAP2Q9NXN4 497 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 SIX4Q9UIU6 781 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 CFAP45Q9UL16 551 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 PCDHA7Q9UN72 937 aa18.86■□□□□ 0.61
CAPN5-207ENST00000533889 TICRRQ7Z2Z1 1910 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 FCHO2Q0JRZ9 810 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 FZD5Q13467 585 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 ZNF528Q3MIS6 628 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 ATL3Q6DD88 541 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 EPM2AIP1Q7L775 607 aaPredicted RBP18.85■□□□□ 0.61
CAPN5-207ENST00000533889 NELFCDQ8IXH7 590 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 TOP6BLQ8N6T0 577 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 RDH13Q8NBN7 331 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 OR5B17Q8NGF7 314 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 CXorf38Q8TB03 319 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 HPDLQ96IR7 371 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 LMAN1LQ9HAT1 526 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 IL21Q9HBE4 155 aa18.85■□□□□ 0.61
CAPN5-207ENST00000533889 FAM186AA6NE01 2351 aa18.84■□□□□ 0.61
CAPN5-207ENST00000533889 CLIC2O15247 247 aa18.84■□□□□ 0.61
CAPN5-207ENST00000533889 KINO60870 393 aaKnown RBP18.84■□□□□ 0.61
CAPN5-207ENST00000533889 CCNE1P24864 410 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms