RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
NXF1-215ENST00000533440 CCL26Q9Y258 94 aa8.49□□□□□ -1.05
NXF1-215ENST00000533440 GPSM3Q9Y4H4 160 aa8.49□□□□□ -1.05
NXF1-215ENST00000533440 THADAQ6YHU6 1953 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 KIAA1549LQ6ZVL6 1849 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 CCDC169A6NNP5 214 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 BTBD18B2RXH4 712 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 H0Y626 953 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 PFKFB2O60825 505 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 DTNBO60941 627 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 TRIM16O95361 564 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 FDPSP14324 419 aaKnown RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 ARSAP15289 507 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 ATF6P18850 670 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 CYP3A5P20815 502 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 BCKDHBP21953 392 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 GJA4P35212 333 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 TUFMP49411 452 aaKnown RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 PEX3P56589 373 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 LMAN2Q12907 356 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 ECM1Q16610 540 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 OVOS1Q6IE37 1185 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 TMEM150AQ86TG1 271 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 DAW1Q8N136 415 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 WASF1Q92558 559 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 USP13Q92995 863 aaPredicted RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 EXOC4Q96A65 974 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 ZBTB45Q96K62 511 aaPredicted RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 GCNAQ96QF7 691 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 TCHPQ9BT92 498 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 BHMT2Q9H2M3 363 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 KIF9Q9HAQ2 790 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 PLEKHA5Q9HAU0 1116 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 TDP1Q9NUW8 608 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 ORC3Q9UBD5 711 aaPredicted RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 INVSQ9Y283 1065 aa8.48□□□□□ -1.05
NXF1-215ENST00000533440 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
NXF1-215ENST00000533440 MYO16Q9Y6X6 1858 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 DENND4CQ5VZ89 1909 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 SPAARA0A1B0GVQ0 90 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 TTC26A0AVF1 554 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 TOM1L1O75674 476 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 F11P03951 625 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 DDX6P26196 483 aaKnown RBP eCLIP8.47□□□□□ -1.05
NXF1-215ENST00000533440 U2AF2P26368 475 aaKnown RBP eCLIP8.47□□□□□ -1.057e-18■■■□□ 14.8
NXF1-215ENST00000533440 AVPR1AP37288 418 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 SIM1P81133 766 aaPredicted RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 SEMA3BQ13214 749 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 ZNF268Q14587 947 aaPredicted RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 NOLC1Q14978 699 aaKnown RBP eCLIP8.47□□□□□ -1.05
NXF1-215ENST00000533440 VEPH1Q14D04 833 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 PDGFRLQ15198 375 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 ARMCX5Q6P1M9 558 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 PDZD3Q86UT5 571 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 TSTD1Q8NFU3 115 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 OR10T2Q8NGX3 314 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 OLIG1Q8TAK6 271 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 ERMNQ8TAM6 284 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 PIGKQ92643 395 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 CD101Q93033 1021 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 CNOT6LQ96LI5 555 aaKnown RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 NTPCRQ9BSD7 190 aaKnown RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 ECT2Q9H8V3 914 aa8.47□□□□□ -1.05
NXF1-215ENST00000533440 UBQLN1Q9UMX0 589 aaKnown RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
NXF1-215ENST00000533440 TNFRSF10BO14763 440 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PPEF2O14830 753 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 REC8O95072 547 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 CYP11A1P05108 521 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 CXCL8P10145 99 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 HARSP12081 509 aaKnown RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 HMGA1P17096 107 aaKnown RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 ENGP17813 658 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PAX3P23760 479 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 MCM7P33993 719 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 DHPSP49366 369 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 NLRP12P59046 1061 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 LILRA4P59901 499 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 IRX6P78412 446 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 SPAG1Q07617 926 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 MCL1Q07820 350 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 BFSP1Q12934 665 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 MAPK7Q13164 816 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 DMP1Q13316 513 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 MGAT5BQ3V5L5 792 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 SLC39A12Q504Y0 691 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 SLC23A3Q6PIS1 610 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 RAB44Q7Z6P3 723 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 MON1AQ86VX9 555 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms