RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 MLPHQ9BV36 600 aaPredicted RBP7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 TM6SF1Q9BZW5 370 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PIH1D3Q9NQM4 214 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 CCDC182A6NF36 153 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PDZK1P1A8MUH7 402 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 TRIM24O15164 1050 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 BYSLQ13895 437 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 CCDC142Q17RM4 750 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ARSHQ5FYA8 562 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ZC3H12BQ5HYM0 836 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 MFSD14CQ5VZR4 134 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 EGFLAMQ63HQ2 1017 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 MTHFD1LQ6UB35 978 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 UNC45BQ8IWX7 931 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 SAMD3Q8N6K7 520 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 LRRN4CLQ8ND94 238 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 RUBCNQ92622 972 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 TEX12Q9BXU0 123 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 MAGEF1Q9HAY2 307 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PXDNQ92626 1479 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM247A6NEH6 219 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 AKAP10O43572 662 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 NCK2O43639 380 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ITGALP20701 1170 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ATP6V1C1P21283 382 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PEX3P56589 373 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 DCAF4L1Q3SXM0 396 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 EPHA10Q5JZY3 1008 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 SYCP2LQ5T4T6 812 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 KLHL17Q6TDP4 642 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 NECAB2Q7Z6G3 386 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 NSL1Q96IY1 281 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PACSIN1Q9BY11 444 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 IRF2BPLQ9H1B7 796 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 MAP3K20Q9NYL2 800 aaKnown RBP7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNRF3Q9ULT6 936 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 L1RE1Q9UN81 338 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 ADGRG1Q9Y653 693 aa7.27□□□□□ -1.25
TGFBR3-210ENST00000533089 PSMD11O00231 422 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KLHL18O94889 574 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 DPEP1P16444 411 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TGFB2P61812 414 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SURF1Q15526 300 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 RABL6Q3YEC7 729 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZMYM1Q5SVZ6 1142 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PCGF5Q86SE9 256 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KBTBD2Q8IY47 623 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 NOA1Q8NC60 698 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 RAET1EQ8TD07 263 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 MLXQ9UH92 298 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PMF1-BGLAPU3KQ54 211 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ABCC12Q96J65 1359 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 F8W810 466 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ORC4O43929 436 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SMNDC1O75940 238 aaKnown RBP eCLIP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TOP3BO95985 862 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 CALB2P22676 271 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 NNMTP40261 264 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 CRKP46108 304 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 CDK8P49336 464 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KPNA2P52292 529 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PSMC6P62333 389 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 BLMHQ13867 455 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SGSM1Q2NKQ1 1148 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PDCD4Q53EL6 469 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 LRRC8EQ6NSJ5 796 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 COL23A1Q86Y22 540 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 FOXP4Q8IVH2 680 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 C12orf50Q8NA57 414 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 FBXL13Q8NEE6 735 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SNX19Q92543 992 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 MMP19Q99542 508 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF184Q99676 751 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 UQCC2Q9BRT2 126 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ELOVL6Q9H5J4 265 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 MRPL47Q9HD33 250 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 FARSBQ9NSD9 589 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 EVPLLA8MZ36 301 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZBTB39O15060 712 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ALOX12P18054 663 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 LPIN1Q14693 890 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 STXBP2Q15833 593 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC5A9Q2M3M2 681 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ARMC4Q5T2S8 1044 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 LSM14AQ8ND56 463 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF668Q96K58 619 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 BTBD6Q96KE9 485 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC35C2Q9NQQ7 365 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 DNAJC11Q9NVH1 559 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 BAIAP2Q9UQB8 552 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PXDNLA1KZ92 1463 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KDM6AO15550 1401 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 A0A0G2JPF8 293 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ANO9A1A5B4 782 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 HNRNPCL3B7ZW38 293 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 AGTP01019 485 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 FYNP06241 537 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PLA2G4BP0C869 781 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 HNRNPCL4P0DMR1 293 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms