RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ABLIM3O94929 683 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 OR4Q2P0C623 313 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 CD58P19256 250 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 GTF2F1P35269 517 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 FANCCQ00597 558 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 ROR1Q01973 937 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 GCNT1Q02742 428 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 KCNMA1Q12791 1236 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 SMARCB1Q12824 385 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 GPR17Q13304 367 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 ADAM15Q13444 863 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 PHLDB3Q6NSJ2 640 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 LILRA6Q6PI73 481 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 RRAGAQ7L523 313 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 APTXQ7Z2E3 356 aaKnown RBP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 OR10T2Q8NGX3 314 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 SLC22A17Q8WUG5 538 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 CASP10Q92851 521 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 TNIP3Q96KP6 325 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 PCMTD1Q96MG8 357 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 PLEKHA4Q9H4M7 779 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
TRAPPC4-211ENST00000533012 APEX2Q9UBZ4 518 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 HCFC2Q9Y5Z7 792 aa12□□□□□ -0.49
TRAPPC4-211ENST00000533012 TRANK1O15050 2925 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 WDR27A2RRH5 827 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 SPATA31D3P0C874 917 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 ATF2P15336 505 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 EPCAMP16422 314 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 PTPN1P18031 435 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 NDST1P52848 882 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 MFAP3P55082 362 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 UBASH3AP57075 661 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 MAPRE1Q15691 268 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 NFE2Q16621 373 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 SLC39A12Q504Y0 691 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 TMEM184AQ6ZMB5 413 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 RNF19BQ6ZMZ0 732 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 EP400NLQ6ZTU2 488 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 SPATA31D4Q6ZUB0 917 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 RTL10Q7L3V2 364 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 ARHGEF19Q8IW93 802 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 KREMEN2Q8NCW0 462 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 PABPC5Q96DU9 382 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 NAP1L5Q96NT1 182 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 TMEM209Q96SK2 561 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 SYT15Q9BQS2 421 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 NT5C1AQ9BXI3 368 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 CLDND1Q9NY35 253 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 AFF4Q9UHB7 1163 aaKnown RBP11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 GTF3C4Q9UKN8 822 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
TRAPPC4-211ENST00000533012 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 MYBPHLA2RUH7 354 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 SPDYE4A6NLX3 237 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 LINC01565O15544 149 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 HCRTO43612 131 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 ATP2C2O75185 946 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 CILPO75339 1184 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 SLC34A2O95436 690 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PSMC1P62191 440 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 INCA1Q0VD86 236 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 KCNC3Q14003 757 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 NR1I3Q14994 352 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 SYCP1Q15431 976 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 UVSSAQ2YD98 709 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 KLHDC7AQ5VTJ3 777 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 FAM171BQ6P995 826 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 CCDC149Q6ZUS6 474 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 CRYBG2Q8N1P7 616 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 MAFAQ8NHW3 353 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 C2orf15Q8WU43 125 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PGLYRP2Q96PD5 576 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 ERGIC2Q96RQ1 377 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 ARID3AQ99856 593 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 LSM14BQ9BX40 385 aaKnown RBP11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 RBSNQ9H1K0 784 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 CYP4F11Q9HBI6 524 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PLCB1Q9NQ66 1216 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 DNAJC12Q9UKB3 198 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 NME7Q9Y5B8 376 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PCDHB5Q9Y5E4 795 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
TRAPPC4-211ENST00000533012 PRRG1O14668 218 aa11.97□□□□□ -0.49
TRAPPC4-211ENST00000533012 TEX33O43247 280 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms