RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 MTIF2P46199 727 aaKnown RBP26.56■■□□□ 1.84
USP48-214ENST00000532737 RAP1GAPP47736 663 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 ACBD6Q9BR61 282 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 FANCLQ9NW38 375 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 MAGEC2Q9UBF1 373 aaPredicted RBP26.56■■□□□ 1.84
USP48-214ENST00000532737 AFF4Q9UHB7 1163 aaKnown RBP26.56■■□□□ 1.84
USP48-214ENST00000532737 DPP7Q9UHL4 492 aa26.56■■□□□ 1.84
USP48-214ENST00000532737 N4BP1O75113 896 aaKnown RBP26.55■■□□□ 1.84
USP48-214ENST00000532737 RFPL2O75678 378 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 SEC24AO95486 1093 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 PDGFRBP09619 1106 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 P4HA1P13674 534 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 ATF2P15336 505 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 ASPAP45381 313 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 CDR1P51861 262 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 MYL5Q02045 173 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 ADCY1Q08828 1119 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 RARS2Q5T160 578 aaKnown RBP26.55■■□□□ 1.84
USP48-214ENST00000532737 SMRP1Q8NCR6 262 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 CCDC150Q8NCX0 1101 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 PGLYRP2Q96PD5 576 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 SNX25Q9H3E2 840 aa26.55■■□□□ 1.84
USP48-214ENST00000532737 GRXCR2A6NFK2 248 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 SPDYE4A6NLX3 237 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 KCNJ18B7U540 433 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 P4HA2O15460 535 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 ZMYND10O75800 440 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 C8AP07357 584 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 WEE2P0C1S8 567 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 GNL1P36915 607 aaPredicted RBP26.54■■□□□ 1.84
USP48-214ENST00000532737 KCNJ12Q14500 433 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 NCAPHQ15003 741 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 LIN9Q5TKA1 542 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 CDKAL1Q5VV42 579 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 ELMSAN1Q6PJG2 1045 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 TMC5Q6UXY8 1006 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 OR6B3Q8NGW1 331 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 TATDN2Q93075 761 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 BCO2Q9BYV7 579 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 NIF3L1Q9GZT8 377 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 NAT10Q9H0A0 1025 aaKnown RBP26.54■■□□□ 1.84
USP48-214ENST00000532737 SFXN1Q9H9B4 322 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 TMLHEQ9NVH6 421 aa26.54■■□□□ 1.84
USP48-214ENST00000532737 ATP2C2O75185 946 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 PCSK1P29120 753 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 TSPY1Q01534 308 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 CCDC142Q17RM4 750 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 SLC39A12Q504Y0 691 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 WDR44Q5JSH3 913 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 INTS6LQ5JSJ4 861 aaKnown RBP26.53■■□□□ 1.84
USP48-214ENST00000532737 ATAD1Q8NBU5 361 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 LMO3Q8TAP4 145 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 SLC7A14Q8TBB6 771 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 PKMYT1Q99640 499 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 ADAM7Q9H2U9 754 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 CRISPLD1Q9H336 500 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 CYP4F11Q9HBI6 524 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 CDH22Q9UJ99 828 aa26.53■■□□□ 1.84
USP48-214ENST00000532737 CCDC195A0A1B0GUA6 201 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 MTMR11A4FU01 709 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 PRRG1O14668 218 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 MBTPS2O43462 519 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 ELF1P32519 619 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 SMAD4Q13485 552 aaKnown RBP26.52■■□□□ 1.84
USP48-214ENST00000532737 MAN2A1Q16706 1144 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 UVSSAQ2YD98 709 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 TCP11X2Q5H9J9 407 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 TCEAL8Q8IYN2 117 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 DCP1BQ8IZD4 617 aaKnown RBP26.52■■□□□ 1.84
USP48-214ENST00000532737 AOPEPQ8N6M6 819 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 CMASQ8NFW8 434 aaPredicted RBP26.52■■□□□ 1.84
USP48-214ENST00000532737 BPIFA3Q9BQP9 254 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 SYT15Q9BQS2 421 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 TUBGCP2Q9BSJ2 902 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 C1QTNF1Q9BXJ1 281 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 ZDHHC7Q9NXF8 308 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 CDH9Q9ULB4 789 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 MAFFQ9ULX9 164 aa26.52■■□□□ 1.84
USP48-214ENST00000532737 MYBPHLA2RUH7 354 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 PAPLNO95428 1278 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 EEF1GP26641 437 aaKnown RBP26.51■■□□□ 1.83
USP48-214ENST00000532737 PSMC1P62191 440 aaKnown RBP26.51■■□□□ 1.83
USP48-214ENST00000532737 CETN1Q12798 172 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 LRMPQ12912 555 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 DUSP4Q13115 394 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 PPM1LQ5SGD2 360 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 PTCRAQ6ISU1 281 aaPredicted RBP26.51■■□□□ 1.83
USP48-214ENST00000532737 CCDC149Q6ZUS6 474 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 EHBP1Q8NDI1 1231 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 ZNF707Q96C28 371 aaPredicted RBP26.51■■□□□ 1.83
USP48-214ENST00000532737 CYP3A43Q9HB55 503 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 GTF3C4Q9UKN8 822 aa26.51■■□□□ 1.83
USP48-214ENST00000532737 USP15Q9Y4E8 981 aaPredicted RBP26.51■■□□□ 1.83
USP48-214ENST00000532737 A8MXQ7 604 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 ZNF165P49910 485 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 ITIH3Q06033 890 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 MIIPQ5JXC2 388 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 FAM171BQ6P995 826 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 GPR149Q86SP6 731 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 TTC9BQ8N6N2 239 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms