RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FAM102BQ5T8I3 360 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 PCNX4Q63HM2 1172 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 SWSAP1Q6NVH7 229 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 PDXDC2PQ6P474 469 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 IYDQ6PHW0 289 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 LRRC6Q86X45 466 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 FBXO25Q8TCJ0 367 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 ACTRT1Q8TDG2 376 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 OSBPL8Q9BZF1 889 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 KLHL4Q9C0H6 718 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 BRD8Q9H0E9 1235 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 AP5M1Q9H0R1 490 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 TXNRD2Q9NNW7 524 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 SAR1AQ9NR31 198 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 FBXO9Q9UK97 447 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 TDRKHQ9Y2W6 561 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 C4AP0C0L4 1744 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 STK36Q9NRP7 1315 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 TMEM150BA6NC51 233 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 ADCY6O43306 1168 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 GGPS1O95749 300 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 EIF2S1P05198 315 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 CDH3P22223 829 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 DSG3P32926 999 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 CPA2P48052 419 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 C21orf59P57076 290 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 NFX1Q12986 1120 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 LPIN1Q14693 890 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 MTFR1Q15390 333 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 EXOC3L4Q17RC7 722 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 BRDTQ58F21 947 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 HERC4Q5GLZ8 1057 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 TMC5Q6UXY8 1006 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 CENPUQ71F23 418 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 LPCAT2Q7L5N7 544 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 MTDHQ86UE4 582 aaKnown RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 SIAH1Q8IUQ4 282 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 PDZD8Q8NEN9 1154 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 CKAP2Q8WWK9 683 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 SKA1Q96BD8 255 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 NRBF2Q96F24 287 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 SERPINI1Q99574 410 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 ECSITQ9BQ95 431 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 NUDT12Q9BQG2 462 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 APOL6Q9BWW8 343 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 DENND2DQ9H6A0 471 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 GIMAP4Q9NUV9 329 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 RRN3Q9NYV6 651 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 ARHGAP20Q9P2F6 1191 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 NKX1-2Q9UD57 310 aaPredicted RBP7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 COL4A3BPQ9Y5P4 624 aa7.12□□□□□ -1.27
TGFBR3-209ENST00000532540 DCDC2CA8MYV0 355 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CXCL11O14625 94 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CSDE1O75534 798 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 FAM13AO94988 1023 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 KRT8P05787 483 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CTSHP09668 335 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 KRT5P13647 590 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 KCNA2P16389 499 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 VEGFBP49765 207 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 RAP1GDS1P52306 607 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CHN2P52757 468 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PDAP1Q13442 181 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MESDQ14696 234 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 LRRC41Q15345 812 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MEI1Q5TIA1 1274 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CCDC137Q6PK04 289 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 DNAJC1Q96KC8 554 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 SPATA33Q96N06 139 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ZBED2Q9BTP6 218 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 STK33Q9BYT3 514 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 GRIP2Q9C0E4 1043 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ARHGAP39Q9C0H5 1083 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TRABDQ9H4I3 376 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 RIC8AQ9NPQ8 531 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 DISC1Q9NRI5 854 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 DDX28Q9NUL7 540 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 HEY2Q9UBP5 337 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ZNF229Q9UJW7 825 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MTO1Q9Y2Z2 717 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CACNA1FO60840 1977 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 A6NJR5 290 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MIF4GDA9UHW6 222 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TSPAN9O75954 239 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PGK1P00558 417 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 SRGAP2CP0DJJ0 459 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 XRCC5P13010 732 aaKnown RBP7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 RARGP13631 454 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PLS3P13797 630 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 ATICP31939 592 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 FLT3LGP49771 235 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 MAP3K7CLP57077 242 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 OSTNP61366 133 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 CAV1Q03135 178 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 PPIL2Q13356 520 aa7.11□□□□□ -1.27
TGFBR3-209ENST00000532540 TRADDQ15628 312 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms