RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 ST13P5Q8NFI4 369 aaPredicted RBP20.38■□□□□ 0.85
UBXN1-211ENST00000531056 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 SPPL2BQ8TCT7 592 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 KBTBD7Q8WVZ9 684 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 ASAH2Q9NR71 780 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 GDE1Q9NZC3 331 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 ZNF318Q5VUA4 2279 aa20.38■□□□□ 0.85
UBXN1-211ENST00000531056 ZNF197O14709 1029 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 MAPK13O15264 365 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 HCRTO43612 131 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 STAU1O95793 577 aaKnown RBP20.37■□□□□ 0.85
UBXN1-211ENST00000531056 ATF6P18850 670 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 ACAT1P24752 427 aaKnown RBP20.37■□□□□ 0.85
UBXN1-211ENST00000531056 LHX1P48742 406 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 CDR1P51861 262 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 EPHB3P54753 998 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 MYL7Q01449 175 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 TDRD10Q5VZ19 366 aaKnown RBP20.37■□□□□ 0.85
UBXN1-211ENST00000531056 FBXL6Q8N531 539 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 GSDMAQ96QA5 445 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 SEPT5Q99719 369 aaPredicted RBP20.37■□□□□ 0.85
UBXN1-211ENST00000531056 RPP25Q9BUL9 199 aaKnown RBP20.37■□□□□ 0.85
UBXN1-211ENST00000531056 XYLT2Q9H1B5 865 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 HCN4Q9Y3Q4 1203 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 ASB3Q9Y575 518 aa20.37■□□□□ 0.85
UBXN1-211ENST00000531056 GADD45BO75293 160 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 C4BPAP04003 597 aaKnown RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 HAPLN1P10915 354 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 SRFP11831 508 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 WARSP23381 471 aaKnown RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 NR2F2P24468 414 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 TUFMP49411 452 aaKnown RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 AP3M2P53677 418 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 DLG4P78352 724 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 MGAT5BQ3V5L5 792 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 CYP4A22Q5TCH4 519 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 CEP135Q66GS9 1140 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 ELOA2Q8IYF1 753 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 TMC2Q8TDI7 906 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 ERCC4Q92889 916 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 PSMG2Q969U7 264 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 MCRS1Q96EZ8 462 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 LPIN3Q9BQK8 851 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 RMND1Q9NWS8 449 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 ABI2Q9NYB9 513 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-211ENST00000531056 FRMD4BQ9Y2L6 1034 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 PCDHB5Q9Y5E4 795 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 PCDHA5Q9Y5H7 936 aa20.36■□□□□ 0.85
UBXN1-211ENST00000531056 MYL4P12829 197 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 PCSK1P29120 753 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 ATICP31939 592 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 MYL6P60660 151 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 NFE2Q16621 373 aaPredicted RBP20.35■□□□□ 0.85
UBXN1-211ENST00000531056 CCDC142Q17RM4 750 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 C1orf220Q5T0J3 134 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 ZNF658Q5TYW1 1059 aaPredicted RBP20.35■□□□□ 0.85
UBXN1-211ENST00000531056 SHKBP1Q8TBC3 707 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 VRTNQ9H8Y1 702 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 ZNF334Q9HCZ1 680 aaPredicted RBP20.35■□□□□ 0.85
UBXN1-211ENST00000531056 CHMP5Q9NZZ3 219 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 PTPRDP23468 1912 aa20.35■□□□□ 0.85
UBXN1-211ENST00000531056 TACC1O75410 805 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 AKAP3O75969 853 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 SMC2O95347 1197 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 VNN1O95497 513 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 GJA1P17302 382 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 FCARP24071 287 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 LMO2P25791 158 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 PRCPP42785 496 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 TRPC3Q13507 836 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 EDRF1Q3B7T1 1238 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 DNAJB7Q7Z6W7 309 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-211ENST00000531056 ITIH5Q86UX2 942 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 SUGP1Q8IWZ8 645 aaKnown RBP20.34■□□□□ 0.85
UBXN1-211ENST00000531056 SMARCE1Q969G3 411 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 SYAP1Q96A49 352 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-211ENST00000531056 MMS19Q96T76 1030 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 KXD1Q9BQD3 176 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 MRPL45Q9BRJ2 306 aaKnown RBP20.34■□□□□ 0.85
UBXN1-211ENST00000531056 ABCB6Q9NP58 842 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 SLC2A4RGQ9NR83 387 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 ARIH1Q9Y4X5 557 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-211ENST00000531056 NME7Q9Y5B8 376 aa20.34■□□□□ 0.85
UBXN1-211ENST00000531056 OBSL1O75147 1896 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 NUP210Q8TEM1 1887 aaPredicted RBP20.33■□□□□ 0.85
UBXN1-211ENST00000531056 PHACTR2O75167 634 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 ECI2O75521 394 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 CFHP08603 1231 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 VCPP55072 806 aaKnown RBP20.33■□□□□ 0.85
UBXN1-211ENST00000531056 TNNC1P63316 161 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 BIRC3Q13489 604 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 TEAD2Q15562 447 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 WDR72Q3MJ13 1102 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 ZACNQ401N2 412 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 FAM171BQ6P995 826 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 GAREM2Q75VX8 874 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 ZSWIM3Q96MP5 696 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 ASB16Q96NS5 453 aa20.33■□□□□ 0.85
UBXN1-211ENST00000531056 SYT15Q9BQS2 421 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms