RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 SEZ6LQ9BYH1 1024 aa7.55□□□□□ -1.2
CTNND1-229ENST00000531014 C6orf62Q9GZU0 229 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-229ENST00000531014 DEFB129Q9H1M3 183 aa7.55□□□□□ -1.2
CTNND1-229ENST00000531014 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
CTNND1-229ENST00000531014 E9PBE3 544 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 HUS1O60921 280 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 PSMA2P25787 234 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 CYP2C19P33261 490 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 POLGP54098 1239 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RPS7P62081 194 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 FKBP3Q00688 224 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 EXOSC10Q01780 885 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RHAGQ02094 409 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ZNF697Q5TEC3 545 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ALKBH5Q6P6C2 394 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 AP1S3Q96PC3 154 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SLC7A5P2Q9GIP4 190 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ZWILCHQ9H900 591 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 HPS4Q9NQG7 708 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NDFIP2Q9NV92 336 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 BAIAP2Q9UQB8 552 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 A0A1W2PQD8 194 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 KANSL1LA0AUZ9 987 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TRIM49BA6NDI0 452 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TRIM49D1C9J1S8 452 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RTN3O95197 1032 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 CCDC130P13994 396 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RAG1P15918 1043 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RRM2P31350 389 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 STX4Q12846 297 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 PDIA2Q13087 525 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RCN1Q15293 331 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 KYNUQ16719 465 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 HSPH1Q92598 858 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 GGT7Q9UJ14 662 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 PRELID1Q9Y255 219 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SF3B1O75533 1304 aaKnown RBP eCLIP7.54□□□□□ -1.25e-6■■■■■ 59.8
CTNND1-229ENST00000531014 JAK2O60674 1132 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 MLNP12872 115 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SCP2P22307 547 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 KCNK10P57789 538 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NDUFAF6Q330K2 333 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 KBTBD12Q3ZCT8 623 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 C5orf22Q49AR2 442 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SPDYAQ5MJ70 313 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 MEI1Q5TIA1 1274 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RNF219Q5W0B1 726 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ITPRIPL1Q6GPH6 555 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RWDD4Q6NW29 188 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 VN1R5Q7Z5H4 357 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 VSTM4Q8IW00 320 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ELMO2Q96JJ3 720 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TRAPPC9Q96Q05 1148 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 OSBPL6Q9BZF3 934 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TRABDQ9H4I3 376 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 AFF4Q9UHB7 1163 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RPH3AQ9Y2J0 694 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 F8W810 466 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ENTPD3O75355 529 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TCN1P20061 433 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ANXA13P27216 316 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 MTFR1Q15390 333 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 MACC1Q6ZN28 852 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 TSHZ1Q6ZSZ6 1077 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 FAM160B2Q86V87 743 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ACAP3Q96P50 834 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 BCL2L14Q9BZR8 327 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 EHD1Q9H4M9 534 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 UBE2TQ9NPD8 197 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-229ENST00000531014 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
CTNND1-229ENST00000531014 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms