RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ARPP19P56211 112 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 NCAPHQ15003 741 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 VWA3BQ502W6 1294 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 ANKRD54Q6NXT1 300 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 DCP1BQ8IZD4 617 aaKnown RBP16.36■□□□□ 0.21
CCS-206ENST00000530961 TTC39CQ8N584 583 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 ANKRD20A12PQ8NF67 263 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 OR10T2Q8NGX3 314 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 KBTBD7Q8WVZ9 684 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 RTP3Q9BQQ7 232 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 NIF3L1Q9GZT8 377 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 ZCWPW1Q9H0M4 648 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 SNX25Q9H3E2 840 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 FAM124BQ9H5Z6 455 aaPredicted RBP16.36■□□□□ 0.21
CCS-206ENST00000530961 APOBEC3GQ9HC16 384 aaKnown RBP16.36■□□□□ 0.21
CCS-206ENST00000530961 CLEC1BQ9P126 229 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 AFF4Q9UHB7 1163 aaKnown RBP16.36■□□□□ 0.21
CCS-206ENST00000530961 FBXW11Q9UKB1 542 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
CCS-206ENST00000530961 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 WDR27A2RRH5 827 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 GTPBP10A4D1E9 387 aaKnown RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 BECN2A8MW95 431 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 TBX10O75333 385 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 TPM2P07951 284 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 KCNA5P22460 613 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 ELF1P32519 619 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 SSTR3P32745 418 aaPredicted RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 ASPAP45381 313 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 HSP90AA4PQ58FG1 418 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 SPOPLQ6IQ16 392 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 CCDC149Q6ZUS6 474 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 AOPEPQ8N6M6 819 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 EHBP1Q8NDI1 1231 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 C2orf15Q8WU43 125 aaKnown RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 MSLNLQ96KJ4 702 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 MRPL45Q9BRJ2 306 aaKnown RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 BCO2Q9BYV7 579 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 MAN1C1Q9NR34 630 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 HSFX1Q9UBD0 423 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 CDH9Q9ULB4 789 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 BARX2Q9UMQ3 279 aaPredicted RBP16.35■□□□□ 0.21
CCS-206ENST00000530961 USP34Q70CQ2 3546 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 GBF1Q92538 1859 aa16.35■□□□□ 0.21
CCS-206ENST00000530961 LRRC10BA6NIK2 292 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 GFRA3O60609 400 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 ZNF18P17022 549 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 PTPN5P54829 565 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 DLX2Q07687 328 aaPredicted RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 MAPRE1Q15691 268 aaKnown RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 NFE2Q16621 373 aaPredicted RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 PUS10Q3MIT2 529 aaKnown RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 LEXMQ3ZCV2 418 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 INTS6LQ5JSJ4 861 aaKnown RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 LIN9Q5TKA1 542 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 CYP26C1Q6V0L0 522 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 UNC93AQ86WB7 457 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 OSTM1Q86WC4 334 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 DHX40Q8IX18 779 aaKnown RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 TCEAL8Q8IYN2 117 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 CMASQ8NFW8 434 aaPredicted RBP16.34■□□□□ 0.21
CCS-206ENST00000530961 LMO3Q8TAP4 145 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 NT5C1BQ96P26 610 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 DNAI2Q9GZS0 605 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 NDST4Q9H3R1 872 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 SMYD3Q9H7B4 428 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 SFXN1Q9H9B4 322 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 ZDHHC7Q9NXF8 308 aa16.34■□□□□ 0.21
CCS-206ENST00000530961 A8MXQ7 604 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 LRRN2O75325 713 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 ZMYND10O75800 440 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 PAPLNO95428 1278 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 WEE2P0C1S8 567 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 OR4Q2P0C623 313 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 SPATA31D3P0C874 917 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 TRIM21P19474 475 aaKnown RBP16.33■□□□□ 0.2
CCS-206ENST00000530961 TBXAS1P24557 533 aaPredicted RBP16.33■□□□□ 0.2
CCS-206ENST00000530961 LMO2P25791 158 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 HOXA9P31269 272 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 CDH8P55286 799 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 ITIH3Q06033 890 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 ADCY1Q08828 1119 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 MIIPQ5JXC2 388 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 FAM171BQ6P995 826 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 SYCE2Q6PIF2 218 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 RNF19BQ6ZMZ0 732 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 SPATA31D4Q6ZUB0 917 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 TATDN2Q93075 761 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 ELMO3Q96BJ8 720 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 TMEM209Q96SK2 561 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 RHOBTB2Q9BYZ6 727 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 ADAM7Q9H2U9 754 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 CYP4F11Q9HBI6 524 aa16.33■□□□□ 0.2
CCS-206ENST00000530961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.21e-8■■■■■ 67.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms