RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GPR15P49685 360 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 PSMC1P62191 440 aaKnown RBP20.08■□□□□ 0.8
GMDS-208ENST00000530927 NCOA4Q13772 614 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 MORC3Q14149 939 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 EDRF1Q3B7T1 1238 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 WDR72Q3MJ13 1102 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 COBLL1Q53SF7 1204 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 SPOPLQ6IQ16 392 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 SCARA5Q6ZMJ2 495 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 SV2AQ7L0J3 742 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 GPR152Q8TDT2 470 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 PKMYT1Q99640 499 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 SEPT5Q99719 369 aaPredicted RBP20.08■□□□□ 0.8
GMDS-208ENST00000530927 SMYD3Q9H7B4 428 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 MYO10Q9HD67 2058 aa20.08■□□□□ 0.8
GMDS-208ENST00000530927 PPP1R3GB7ZBB8 358 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 CLSTN1O94985 981 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 LAMP2P13473 410 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 PSMC2P35998 433 aaKnown RBP20.07■□□□□ 0.8
GMDS-208ENST00000530927 CDH8P55286 799 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 ZXDAP98168 799 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 MGAT5BQ3V5L5 792 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 ZACNQ401N2 412 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 INTS6LQ5JSJ4 861 aaKnown RBP20.07■□□□□ 0.8
GMDS-208ENST00000530927 RTL10Q7L3V2 364 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 TMEM86AQ8N2M4 240 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 FGF13Q92913 245 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 PI4K2AQ9BTU6 479 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 SDCBP2Q9H190 292 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 GTF3C4Q9UKN8 822 aa20.07■□□□□ 0.8
GMDS-208ENST00000530927 MYBPHLA2RUH7 354 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 ALADP13716 330 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 PTPN2P17706 415 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 ATF6P18850 670 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 RPL13P26373 211 aaKnown RBP20.06■□□□□ 0.8
GMDS-208ENST00000530927 ZNF699Q32M78 642 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 PRSS36Q5K4E3 855 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 SDHAF4Q5VUM1 108 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 NPAS3Q8IXF0 933 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 PLCD3Q8N3E9 789 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 GIPC2Q8TF65 315 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 ACBD6Q9BR61 282 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 RPP25Q9BUL9 199 aaKnown RBP20.06■□□□□ 0.8
GMDS-208ENST00000530927 DPEP3Q9H4B8 488 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 KCNK12Q9HB15 430 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 LMBRD1Q9NUN5 540 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 EPS15L1Q9UBC2 864 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 CTNND2Q9UQB3 1225 aa20.06■□□□□ 0.8
GMDS-208ENST00000530927 MRPS23Q9Y3D9 190 aaKnown RBP20.06■□□□□ 0.8
GMDS-208ENST00000530927 MAPK13O15264 365 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 NARSO43776 548 aaKnown RBP20.05■□□□□ 0.8
GMDS-208ENST00000530927 MOSPD3O75425 235 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 HLA-DRAP01903 254 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 WARSP23381 471 aaKnown RBP20.05■□□□□ 0.8
GMDS-208ENST00000530927 STX17P56962 302 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 TNNC1P63316 161 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 MYL7Q01449 175 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 TSPY1Q01534 308 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 TMC8Q8IU68 726 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 ZC3H3Q8IXZ2 948 aaKnown RBP20.05■□□□□ 0.8
GMDS-208ENST00000530927 EDAQ92838 391 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 MCRS1Q96EZ8 462 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 ZNF334Q9HCZ1 680 aaPredicted RBP20.05■□□□□ 0.8
GMDS-208ENST00000530927 CRTAC1Q9NQ79 661 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.05■□□□□ 0.89e-8■□□□□ 8.6
GMDS-208ENST00000530927 CDH7Q9ULB5 785 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 MAFFQ9ULX9 164 aa20.05■□□□□ 0.8
GMDS-208ENST00000530927 GOLGA6L22H0YM25 854 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 CETN3O15182 167 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 HAPLN1P10915 354 aaPredicted RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 MYL4P12829 197 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 KRT13P13646 458 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 CCNE1P24864 410 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 CYP2F1P24903 491 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 LHX1P48742 406 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 AP3M2P53677 418 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 PARM1Q6UWI2 310 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 INTS8Q75QN2 995 aaKnown RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 DCP1BQ8IZD4 617 aaKnown RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 TAS1R2Q8TE23 839 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 NELFBQ8WX92 580 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 FGF14Q92915 247 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 SYAP1Q96A49 352 aaPredicted RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 ZNF512Q96ME7 567 aaPredicted RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 TSG101Q99816 390 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 DUSP9Q99956 384 aaKnown RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 SYT15Q9BQS2 421 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 LRRC3Q9BY71 257 aa20.04■□□□□ 0.8
GMDS-208ENST00000530927 APOBEC3GQ9HC16 384 aaKnown RBP20.04■□□□□ 0.8
GMDS-208ENST00000530927 IKBKBO14920 756 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 STAU1O95793 577 aaKnown RBP20.03■□□□□ 0.8
GMDS-208ENST00000530927 ATICP31939 592 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 PIK3CAP42336 1068 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 ALDH1A3P47895 512 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 EPHB3P54753 998 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 ORC1Q13415 861 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 HTR4Q13639 388 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 PDZD4Q76G19 769 aaPredicted RBP20.03■□□□□ 0.8
GMDS-208ENST00000530927 DPH6Q7L8W6 267 aa20.03■□□□□ 0.8
GMDS-208ENST00000530927 ELMOD1Q8N336 334 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms