RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 POLD4Q9HCU8 107 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 FAM114A2Q9NRY5 505 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 RNF181Q9P0P0 153 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 BTBD7Q9P203 1132 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 RASAL2Q9UJF2 1139 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 LRFN2Q9ULH4 789 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 RNF112Q9ULX5 631 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 SCAF8Q9UPN6 1271 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 CNTN6Q9UQ52 1028 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 NOC2LQ9Y3T9 749 aaKnown RBP5.95□□□□□ -1.46
PCF11-205ENST00000530906 ADGRA3Q8IWK6 1321 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 ADGRA2Q96PE1 1338 aa5.95□□□□□ -1.46
PCF11-205ENST00000530906 COL1A2P08123 1366 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 DOCK5Q9H7D0 1870 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TMEM150BA6NC51 233 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 LRRIQ4A6NIV6 560 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TISP43B9A030 160 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 KRIT1O00522 736 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 NOP56O00567 594 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 PODXLO00592 558 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 OGTO15294 1046 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MAGEB2O15479 319 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CLDN3O15551 220 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SART1O43290 800 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 STRNO43815 780 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 HBP1O60381 514 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 LRRN2O75325 713 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 DDNO94850 711 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 LSM8O95777 96 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 TFRCP02786 760 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 CTNNA2P26232 953 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CHRNA3P32297 505 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CXCR5P32302 372 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CYP2C19P33261 490 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TCF7P36402 384 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 PIK3CAP42336 1068 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 GCLCP48506 637 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 PTENP60484 403 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SP2Q02086 613 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CNTN2Q02246 1040 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MCL1Q07820 350 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 PTP4A2Q12974 167 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TTLL4Q14679 1199 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MAPK6Q16659 721 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CLEC16AQ2KHT3 1053 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ZNF484Q5JVG2 852 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CELF3Q5SZQ8 465 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 TREML2Q5T2D2 321 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 LDLRAD1Q5T700 205 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SEL1L2Q5TEA6 688 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 LIN9Q5TKA1 542 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 PRAMEF18Q5VWM3 479 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ACAD10Q6JQN1 1059 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 LRIG3Q6UXM1 1119 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SEPT14Q6ZU15 432 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 HFE2Q6ZVN8 426 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SYDE1Q6ZW31 735 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 BRSK2Q8IWQ3 736 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CD302Q8IX05 232 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 RPUSD2Q8IZ73 545 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 TTC39CQ8N584 583 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TAS1R2Q8TE23 839 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CCDC127Q96BQ5 260 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SAAL1Q96ER3 474 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 CDCA5Q96FF9 252 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 KREMEN1Q96MU8 473 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MMP19Q99542 508 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ARID3AQ99856 593 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SH3GL2Q99962 352 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ZSWIM1Q9BR11 485 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 FAM213AQ9BRX8 229 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MSTO1Q9BUK6 570 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ZNF518BQ9C0D4 1074 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 TSPYL1Q9H0U9 437 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 THAP2Q9H0W7 228 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 IKZF4Q9H2S9 585 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 VRTNQ9H8Y1 702 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MRPL47Q9HD33 250 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 VTA1Q9NP79 307 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 HOMER3Q9NSC5 361 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 SEPT11Q9NVA2 429 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 RBAKQ9NYW8 714 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 CTTNBP2NLQ9P2B4 639 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 PARP2Q9UGN5 583 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 FEZ2Q9UHY8 353 aaPredicted RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 ADAM21Q9UKJ8 722 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 MTUS1Q9ULD2 1270 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 UTP11Q9Y3A2 253 aaKnown RBP5.94□□□□□ -1.46
PCF11-205ENST00000530906 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.94□□□□□ -1.46
PCF11-205ENST00000530906 SCINQ9Y6U3 715 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ZSWIM8A7E2V4 1837 aa5.94□□□□□ -1.46
PCF11-205ENST00000530906 ZNF236Q9UL36 1845 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 RBM47A0AV96 593 aaKnown RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA8IPA6NC78 632 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 GOLGA8JA6NMD2 632 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 SRRM3A6NNA2 597 aaPredicted RBP5.93□□□□□ -1.46
PCF11-205ENST00000530906 ADM5C9JUS6 153 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 H3BQF6 201 aa5.93□□□□□ -1.46
PCF11-205ENST00000530906 NDC80O14777 642 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms