RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TUFMP49411 452 aaKnown RBP9.77□□□□□ -0.85
VPS11-203ENST00000529545 SMTNP53814 917 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 CREB5Q02930 508 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 FOXC1Q12948 553 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 RUNX3Q13761 415 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 GNL2Q13823 731 aaKnown RBP9.77□□□□□ -0.85
VPS11-203ENST00000529545 NOLC1Q14978 699 aaKnown RBP eCLIP9.77□□□□□ -0.85
VPS11-203ENST00000529545 SLC10A6Q3KNW5 377 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 TMEM196Q5HYL7 178 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 CC2D1AQ6P1N0 951 aaPredicted RBP9.77□□□□□ -0.85
VPS11-203ENST00000529545 ATAD1Q8NBU5 361 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 MKNK1Q9BUB5 465 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 SMOC1Q9H4F8 434 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 GKN1Q9NS71 199 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 DDX19AQ9NUU7 478 aaKnown RBP9.77□□□□□ -0.85
VPS11-203ENST00000529545 HSFX1Q9UBD0 423 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 ZMIZ1Q9ULJ6 1067 aa9.77□□□□□ -0.85
VPS11-203ENST00000529545 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 CEP295Q9C0D2 2601 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 MTMR11A4FU01 709 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 C4orf47A7E2U8 309 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 C1QTNF9BB2RNN3 333 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 TRDMT1O14717 391 aaKnown RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 SLC16A4O15374 487 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 VNN2O95498 520 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 CAVIN2O95810 425 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 CLTAP09496 248 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 C1QTNF9P0C862 333 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 ODC1P11926 461 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 CYP3A5P20815 502 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 DRD1P21728 446 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 PAX3P23760 479 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 LRPAP1P30533 357 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 HOXC13P31276 330 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 GBP1P32455 592 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 AVPR1AP37288 418 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 PPP2R3AQ06190 1150 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 ZNF252P-AS1Q0IIN9 211 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 BFSP1Q12934 665 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 KYAT1Q16773 422 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 MGAT5BQ3V5L5 792 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 PLK5Q496M5 336 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 FBXO43Q4G163 708 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 SEZ6Q53EL9 994 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 KRT79Q5XKE5 535 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 FSTL4Q6MZW2 842 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 PKN3Q6P5Z2 889 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 ZPBP2Q6X784 338 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 NUDT18Q6ZVK8 323 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 TAS1R3Q7RTX0 852 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 C11orf74Q86VG3 221 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 KDF1Q8NAX2 398 aaPredicted RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 NSUN7Q8NE18 718 aaKnown RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 SNX29Q8TEQ0 813 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 ZBTB45Q96K62 511 aaPredicted RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 TSPAN18Q96SJ8 248 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 SEPT5Q99719 369 aaPredicted RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 TIPINQ9BVW5 301 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
VPS11-203ENST00000529545 NOL7Q9UMY1 257 aaKnown RBP9.76□□□□□ -0.85
VPS11-203ENST00000529545 ATRXP46100 2492 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 E9PMD0 336 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 H0YCG3 227 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 ABLIM1O14639 778 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 KHNYNO15037 678 aaKnown RBP9.75□□□□□ -0.85
VPS11-203ENST00000529545 RNF40O75150 1001 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 SOAT2O75908 522 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 PRAMEF12O95522 483 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 APBB3O95704 486 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 CXCL8P10145 99 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 DDX6P26196 483 aaKnown RBP eCLIP9.75□□□□□ -0.85
VPS11-203ENST00000529545 AARSP49588 968 aaKnown RBP eCLIP9.75□□□□□ -0.85
VPS11-203ENST00000529545 CYP4F8P98187 520 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 SPAG1Q07617 926 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 PDIA5Q14554 519 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 ACAP1Q15027 740 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 ECM1Q16610 540 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 ME3Q16798 604 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 TTC38Q5R3I4 469 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 TCEAL6Q6IPX3 200 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 CMTM8Q8IZV2 173 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 CCDC26Q8TAB7 109 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 SPIRE2Q8WWL2 714 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 TCEAL3Q969E4 200 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 ACDQ96AP0 544 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 BICD1Q96G01 975 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 HHIPQ96QV1 700 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 FAM83CQ9BQN1 747 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 NTPCRQ9BSD7 190 aaKnown RBP9.75□□□□□ -0.85
VPS11-203ENST00000529545 DUSP15Q9H1R2 295 aaPredicted RBP9.75□□□□□ -0.85
VPS11-203ENST00000529545 EBF3Q9H4W6 596 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 KIF9Q9HAQ2 790 aa9.75□□□□□ -0.85
VPS11-203ENST00000529545 EML5Q05BV3 1969 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 ZNF638Q14966 1978 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 TTC26A0AVF1 554 aa9.74□□□□□ -0.85
VPS11-203ENST00000529545 BCLAF3A2AJT9 711 aaKnown RBP9.74□□□□□ -0.85
VPS11-203ENST00000529545 SFI1A8K8P3 1242 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms