RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRIM50Q86XT4 487 aa18.79■□□□□ 0.6
LTBP3-210ENST00000528516 PDIK1LQ8N165 341 aa18.79■□□□□ 0.6
LTBP3-210ENST00000528516 ATG4CQ96DT6 458 aa18.79■□□□□ 0.6
LTBP3-210ENST00000528516 HEY2Q9UBP5 337 aa18.79■□□□□ 0.6
LTBP3-210ENST00000528516 PCDHA10Q9Y5I2 948 aa18.79■□□□□ 0.6
LTBP3-210ENST00000528516 EP400Q96L91 3159 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 ZWINTO95229 277 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 STAMBPO95630 424 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 CEP70Q8NHQ1 597 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 MED10Q9BTT4 135 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 OCEL1Q9H607 264 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 NDE1Q9NXR1 346 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 MCF2LO15068 1137 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 TBX10O75333 385 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 RGS7P49802 495 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 ACSBG2Q5FVE4 666 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 STRIP1Q5VSL9 837 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 ISLR2Q6UXK2 745 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 RNF149Q8NC42 400 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 SLC35C1Q96A29 364 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 NINJ2Q9NZG7 142 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 PCYOX1Q9UHG3 505 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 WASF2Q9Y6W5 498 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 M0R2N6 131 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 RALAP11233 206 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 DLG4P78352 724 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 P3H1Q32P28 736 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 CYP4A22Q5TCH4 519 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 PALB2Q86YC2 1186 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 SLC7A6OSQ96CW6 309 aaPredicted RBP18.78■□□□□ 0.6
LTBP3-210ENST00000528516 BORCS6Q96GS4 357 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
LTBP3-210ENST00000528516 RBM15Q96T37 977 aaKnown RBP eCLIP18.78■□□□□ 0.6
LTBP3-210ENST00000528516 GLIS2Q9BZE0 524 aaPredicted RBP18.78■□□□□ 0.6
LTBP3-210ENST00000528516 ANXA13P27216 316 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 ACVR2BQ13705 512 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 KCTD2Q14681 263 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 ENDOVQ8N8Q3 282 aaKnown RBP18.77■□□□□ 0.6
LTBP3-210ENST00000528516 MCUQ8NE86 351 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 NLRP7Q8WX94 980 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 COG5Q9UP83 839 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 MYH4Q9Y623 1939 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 LYNP07948 512 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 NR3C2P08235 984 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 WDR4P57081 412 aaKnown RBP18.77■□□□□ 0.6
LTBP3-210ENST00000528516 PSMC1P62191 440 aaKnown RBP18.77■□□□□ 0.6
LTBP3-210ENST00000528516 COG7P83436 770 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 FAXCQ5TGI0 409 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 LVRNQ6Q4G3 990 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 CFAP57Q96MR6 1250 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 OLFM3Q96PB7 478 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 NUP98P52948 1817 aa18.77■□□□□ 0.6
LTBP3-210ENST00000528516 ITIH2P19823 946 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 NEK3P51956 506 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF568Q3ZCX4 644 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 LGSNQ5TDP6 509 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 ADPGKQ9BRR6 497 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 TRIM55Q9BYV6 548 aa18.77■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF70Q9UC06 446 aaPredicted RBP18.77■□□□□ 0.59
LTBP3-210ENST00000528516 ARFIP2P53365 341 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 NOP14P78316 857 aaKnown RBP18.76■□□□□ 0.59
LTBP3-210ENST00000528516 FOXB2Q5VYV0 432 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF772Q68DY9 489 aaPredicted RBP18.76■□□□□ 0.59
LTBP3-210ENST00000528516 FLAD1Q8NFF5 587 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 BTBD10Q9BSF8 475 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 CADM1Q9BY67 442 aaKnown RBP18.76■□□□□ 0.59
LTBP3-210ENST00000528516 C10orf88Q9H8K7 445 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 CSPG5O95196 566 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 SLC4A1P02730 911 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 RRM1P23921 792 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 TMEM62Q0P6H9 643 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 ZNF699Q32M78 642 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 ANKLE1Q8NAG6 615 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 PTPRN2Q92932 1015 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 PPP1R36Q96LQ0 422 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 MCEEQ96PE7 176 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 MTMR9Q96QG7 549 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 TBC1D22BQ9NU19 505 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 RNF19AQ9NV58 838 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 RTP1P59025 263 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 DSG1Q02413 1049 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 STAT4Q14765 748 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 SLC35G1Q2M3R5 365 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 LLGL2Q6P1M3 1020 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 RASSF3Q86WH2 238 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 NSUN6Q8TEA1 469 aaKnown RBP18.76■□□□□ 0.59
LTBP3-210ENST00000528516 ANKRD36BP1Q96IX9 119 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 MPP4Q96JB8 637 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 CLIC5Q9NZA1 410 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 SEL1LQ9UBV2 794 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 SLC9A2Q9UBY0 812 aa18.76■□□□□ 0.59
LTBP3-210ENST00000528516 MYCP01106 439 aaPredicted RBP18.75■□□□□ 0.59
LTBP3-210ENST00000528516 TMCO4Q5TGY1 634 aa18.75■□□□□ 0.59
LTBP3-210ENST00000528516 C1orf146Q5VVC0 180 aa18.75■□□□□ 0.59
LTBP3-210ENST00000528516 HHIPL2Q6UWX4 724 aa18.75■□□□□ 0.59
LTBP3-210ENST00000528516 CENPUQ71F23 418 aa18.75■□□□□ 0.59
LTBP3-210ENST00000528516 RIBC1Q8N443 379 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms