RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SEZ6LQ9BYH1 1024 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 C6orf62Q9GZU0 229 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-216ENST00000527467 DEFB129Q9H1M3 183 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 CYP39A1Q9NYL5 469 aa7.55□□□□□ -1.2
CTNND1-216ENST00000527467 E9PBE3 544 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 HUS1O60921 280 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ZCCHC18P0CG32 403 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 PSMA2P25787 234 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 CYP2C19P33261 490 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 POLGP54098 1239 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RPS7P62081 194 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 FKBP3Q00688 224 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 EXOSC10Q01780 885 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RHAGQ02094 409 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 PTPN12Q05209 780 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF697Q5TEC3 545 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 GALNT17Q6IS24 598 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ALKBH5Q6P6C2 394 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 AP1S3Q96PC3 154 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SLC7A5P2Q9GIP4 190 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ZWILCHQ9H900 591 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 HPS4Q9NQG7 708 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NDFIP2Q9NV92 336 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 BAIAP2Q9UQB8 552 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 MROH7Q68CQ1 1323 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 A0A1W2PQ27 194 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 A0A1W2PQ64 194 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 A0A1W2PQD8 194 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 KANSL1LA0AUZ9 987 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TRIM49BA6NDI0 452 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TRIM49D1C9J1S8 452 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L10C9JJH3 530 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RTN3O95197 1032 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 CCDC130P13994 396 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RAG1P15918 1043 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RRM2P31350 389 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NCKAP1LP55160 1127 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 STX4Q12846 297 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 PDIA2Q13087 525 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RCN1Q15293 331 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 KYNUQ16719 465 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 HSPH1Q92598 858 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 APOL6Q9BWW8 343 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 GGT7Q9UJ14 662 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 PRELID1Q9Y255 219 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SF3B1O75533 1304 aaKnown RBP eCLIP7.54□□□□□ -1.25e-6■■■■■ 59.8
CTNND1-216ENST00000527467 JAK2O60674 1132 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 MLNP12872 115 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SCP2P22307 547 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 KCNK10P57789 538 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NDUFAF6Q330K2 333 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 KBTBD12Q3ZCT8 623 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 C5orf22Q49AR2 442 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SPDYAQ5MJ70 313 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 MEI1Q5TIA1 1274 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RNF219Q5W0B1 726 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ITPRIPL1Q6GPH6 555 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RWDD4Q6NW29 188 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 VN1R5Q7Z5H4 357 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 VSTM4Q8IW00 320 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SVOPQ8N4V2 548 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 C7orf31Q8N865 590 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ELMO2Q96JJ3 720 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TRAPPC9Q96Q05 1148 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 OSBPL6Q9BZF3 934 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TRABDQ9H4I3 376 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SUGCTQ9HAC7 445 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 AFF4Q9UHB7 1163 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RPH3AQ9Y2J0 694 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 R3HDM2Q9Y2K5 976 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 GRID2IPA4D2P6 1211 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 F8W810 466 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ENTPD3O75355 529 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TCN1P20061 433 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ANXA13P27216 316 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 GTF2H3Q13889 308 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 MTFR1Q15390 333 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 MACC1Q6ZN28 852 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 TSHZ1Q6ZSZ6 1077 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 FAM160B2Q86V87 743 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ACAP3Q96P50 834 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 SLC9A7Q96T83 725 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 BCL2L14Q9BZR8 327 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 EHD1Q9H4M9 534 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 UBE2TQ9NPD8 197 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-216ENST00000527467 AAASQ9NRG9 546 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 RGS18Q9NS28 235 aa7.54□□□□□ -1.2
CTNND1-216ENST00000527467 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms