RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 IPPQ9Y573 584 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 GOLGA6L10A0A0M3HER8 536 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 OPA1O60313 960 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 VDRP11473 427 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 EPHB4P54760 987 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 MRPS25P82663 173 aaKnown RBP17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 RPAINQ86UA6 219 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 IFT20Q8IY31 132 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 WDTC1Q8N5D0 677 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 RAET1EQ8TD07 263 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 TWNKQ96RR1 684 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 STRIP2Q9ULQ0 834 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 CASP8AP2Q9UKL3 1982 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 GOLGA8KD6RF30 607 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 PROSCO94903 275 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 KCNE1P15382 129 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 MARCKSL1P49006 195 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 NDST1P52848 882 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 ORC1Q13415 861 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 PPP2R5EQ16537 467 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 XKR4Q5GH76 650 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 ALS2CLQ60I27 953 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 DENND1BQ6P3S1 775 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 RNF180Q86T96 592 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 NT5C1AQ9BXI3 368 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 TRIM7Q9C029 511 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 HMGXB4Q9UGU5 601 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 SNX9Q9Y5X1 595 aa17.18■□□□□ 0.34
SNRNP35-204ENST00000527158 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 HSPA6P17066 643 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 APLP1P51693 650 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 TAP1Q03518 808 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 NFX1Q12986 1120 aaKnown RBP17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 SGO2Q562F6 1265 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 C9orf57Q5W0N0 161 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 CCSAPQ6IQ19 270 aaPredicted RBP17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 DNAJC24Q6P3W2 148 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 SMG8Q8ND04 991 aaKnown RBP17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 DDX20Q9UHI6 824 aaKnown RBP17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 ST3GAL5Q9UNP4 418 aa17.17■□□□□ 0.34
SNRNP35-204ENST00000527158 SART1O43290 800 aaKnown RBP17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 HEXIM1O94992 359 aaKnown RBP17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 GNRH1P01148 92 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CTSHP09668 335 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CNGA2Q16280 664 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 PTGISQ16647 500 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CCDC26Q8TAB7 109 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 SENP6Q9GZR1 1112 aaPredicted RBP17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 SLITRK6Q9H5Y7 841 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 IP6K2Q9UHH9 426 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 GPR182O15218 404 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CHRNA1P02708 482 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 PYGMP11217 842 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 ITGA4P13612 1032 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 MAP2K2P36507 400 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 PNPLA4P41247 253 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 MAP3K21Q5TCX8 1036 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 DCUN1D2Q6PH85 259 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 SRLQ86TD4 932 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CPNE8Q86YQ8 564 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 CAVIN3Q969G5 261 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 ZNF560Q96MR9 790 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 FAM107BQ9H098 131 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 DDX47Q9H0S4 455 aaKnown RBP17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
SNRNP35-204ENST00000527158 PPEF2O14830 753 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 RAD51CO43502 376 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 CABYRO75952 493 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 GLI1P08151 1106 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 CYP3A5P20815 502 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 THPOP40225 353 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 GUCY2DQ02846 1103 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 FBXO47Q5MNV8 452 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 PXYLP1Q8TE99 480 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 WNT8BQ93098 351 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 EPB41L5Q9HCM4 733 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 RNF19AQ9NV58 838 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 PIRO00625 290 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 MICAL2O94851 1124 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 MAN1A1P33908 653 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 STILQ15468 1287 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 DPH6Q7L8W6 267 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 ADAT2Q7Z6V5 191 aaKnown RBP17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 C3orf20Q8ND61 904 aa17.15■□□□□ 0.34
SNRNP35-204ENST00000527158 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms