RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 GPBP1L1Q9HC44 474 aaPredicted RBP16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 SNTG2Q9NY99 539 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 PSD3Q9NYI0 1048 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 CNTN3Q9P232 1028 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 PARP2Q9UGN5 583 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 FEZ2Q9UHY8 353 aaPredicted RBP16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 TREHO43280 583 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 CETN2P41208 172 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 PURAQ00577 322 aaKnown RBP16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 SPDYCQ5MJ68 293 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 TTC27Q6P3X3 843 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 BEST2Q8NFU1 509 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 FNIP1Q8TF40 1166 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 TRIM51Q9BSJ1 452 aa16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.79■□□□□ 0.28
FOXRED1-207ENST00000527004 TCRBV7S2A1N4TA0A589 114 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 SIGLEC16A6NMB1 481 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 CA12O43570 354 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 TAS2R40P59535 323 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 BEX3Q00994 111 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 STILQ15468 1287 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 TAF2Q6P1X5 1199 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 SYDE1Q6ZW31 735 aaPredicted RBP16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 CCDC105Q8IYK2 499 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 RCOR2Q8IZ40 523 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 C7orf31Q8N865 590 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 ZIM3Q96PE6 472 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 MCEEQ96PE7 176 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 TWNKQ96RR1 684 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 EIF2AQ9BY44 585 aaKnown RBP16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 NEUROG2Q9H2A3 272 aa16.78■□□□□ 0.28
FOXRED1-207ENST00000527004 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 GABRB2P47870 512 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 IRX5P78411 483 aaPredicted RBP16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 PTPN20Q4JDL3 420 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 SGO2Q562F6 1265 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 LRIG3Q6UXM1 1119 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 MIS12Q9H081 205 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 DPH5Q9H2P9 285 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
FOXRED1-207ENST00000527004 O00370 1275 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 MICAL2O94851 1124 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 ECEL1O95672 775 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 CD4P01730 458 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 KRT3P12035 628 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 GPD2P43304 727 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 FCGRTP55899 365 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 GJA9P57773 515 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 COPS2P61201 443 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 NKX3-2P78367 333 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 DMTNQ08495 405 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 KLF1Q13351 362 aaPredicted RBP16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 XKR4Q5GH76 650 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 PIK3R5Q8WYR1 880 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 RBM41Q96IZ5 413 aaKnown RBP16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 ZMAT2Q96NC0 199 aaKnown RBP16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 FMO2Q99518 471 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 ZDHHC18Q9NUE0 388 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 HMGXB4Q9UGU5 601 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 USTQ9Y2C2 406 aa16.77■□□□□ 0.27
FOXRED1-207ENST00000527004 XPOTO43592 962 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 NDST1P52848 882 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 ZNF252P-AS1Q0IIN9 211 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 CCNG2Q16589 344 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 MFSD14CQ5VZR4 134 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 LCLAT1Q6UWP7 414 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 GRK7Q8WTQ7 553 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 TMEM40Q8WWA1 233 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 RIN2Q8WYP3 895 aaPredicted RBP16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 OSBPL8Q9BZF1 889 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 DDX56Q9NY93 547 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 CYTH4Q9UIA0 394 aa16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
FOXRED1-207ENST00000527004 PPFIA2O75334 1257 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 RECQL4O94761 1208 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 GJB6O95452 261 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 RALAP11233 206 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 CYBAP13498 195 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 KCNE1P15382 129 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 CTGFP29279 349 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 PTPN7P35236 360 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 SSR1P43307 286 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 ZNF200P98182 395 aaPredicted RBP16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 ACAP1Q15027 740 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 TMC3Q7Z5M5 1100 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 POLNQ7Z5Q5 900 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 UNC93AQ86WB7 457 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 CCDC50Q8IVM0 306 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 CPXM1Q96SM3 734 aa16.75■□□□□ 0.27
FOXRED1-207ENST00000527004 MTG1Q9BT17 334 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms