RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TAF3Q5VWG9 929 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 GAREM2Q75VX8 874 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 ARID3BQ8IVW6 561 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-204ENST00000526468 MYCT1Q8N699 235 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 OR10T2Q8NGX3 314 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 SENP8Q96LD8 212 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 C8orf33Q9H7E9 229 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-204ENST00000526468 PARVGQ9HBI0 331 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 GTSE1Q9NYZ3 720 aa12.7□□□□□ -0.38
CAPN1-204ENST00000526468 GON4LQ3T8J9 2241 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 PIGRP01833 764 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 TPM3P06753 285 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 ATF6P18850 670 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 CDC25CP30307 473 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 LILRA4P59901 499 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 ZBTB6Q15916 424 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 DGKKQ5KSL6 1271 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 C9orf57Q5W0N0 161 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
CAPN1-204ENST00000526468 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 CEP68Q76N32 757 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 RALGPS2Q86X27 583 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-204ENST00000526468 KCTD17Q8N5Z5 321 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 CELF5Q8N6W0 485 aaKnown RBP12.69□□□□□ -0.38
CAPN1-204ENST00000526468 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 KIF2CQ99661 725 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 MKNK1Q9BUB5 465 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 SMG9Q9H0W8 520 aaKnown RBP12.69□□□□□ -0.38
CAPN1-204ENST00000526468 ASB3Q9Y575 518 aa12.69□□□□□ -0.38
CAPN1-204ENST00000526468 ADAMTS9Q9P2N4 1935 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 MYBPHLA2RUH7 354 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 RETP07949 1114 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 PLCG1P19174 1290 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 TGM1P22735 817 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 GJB2P29033 226 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 UBA7P41226 1012 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 MLLT6P55198 1093 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 TNK2Q07912 1038 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 TAF12Q16514 161 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 ARSHQ5FYA8 562 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 SLC39A4Q6P5W5 647 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 PRR23CQ6ZRP0 262 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 DNAJB7Q7Z6W7 309 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 LONP2Q86WA8 852 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 BPIFB1Q8TDL5 484 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 AK8Q96MA6 479 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 PYM1Q9BRP8 204 aaKnown RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 CPSF3Q9UKF6 684 aaKnown RBP12.68□□□□□ -0.38
CAPN1-204ENST00000526468 DSEQ9UL01 958 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 ZKSCAN5Q9Y2L8 839 aa12.68□□□□□ -0.38
CAPN1-204ENST00000526468 FAM208BQ5VWN6 2430 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 A0A0B4J269 797 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 TISP43B9A030 160 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 K7ESF4 209 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-204ENST00000526468 SLC26A4O43511 780 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 LRP3O75074 770 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-204ENST00000526468 SCP2P22307 547 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 NMT1P30419 496 aaKnown RBP12.67□□□□□ -0.38
CAPN1-204ENST00000526468 ACOT2P49753 483 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 TAF6P49848 677 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 ZNF131P52739 623 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 MCM6Q14566 821 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
CAPN1-204ENST00000526468 PPM1JQ5JR12 505 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 METTL23Q86XA0 190 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 CD302Q8IX05 232 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 LRRC15Q8TF66 581 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 RAD54LQ92698 747 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 KCNN1Q92952 543 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 ZCWPW1Q9H0M4 648 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 GZF1Q9H116 711 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-204ENST00000526468 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 C2orf42Q9NWW7 574 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 OBP2AQ9NY56 170 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 HSFX1Q9UBD0 423 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 DERAQ9Y315 318 aa12.67□□□□□ -0.38
CAPN1-204ENST00000526468 SLC30A4O14863 429 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 CYP11A1P05108 521 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
CAPN1-204ENST00000526468 ABCD1P33897 745 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 CNR2P34972 360 aa12.66□□□□□ -0.38
CAPN1-204ENST00000526468 AVPR1AP37288 418 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms