RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 IGF2RP11717 2491 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 WDFY3Q8IZQ1 3526 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 F11P03951 625 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 ARSAP15289 507 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 ADSSP30520 456 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 ALDH1A3P47895 512 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 ACOT2P49753 483 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 LIG4P49917 911 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 SMTNP53814 917 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 GTF2BQ00403 316 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 MCM6Q14566 821 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 ARHGAP29Q52LW3 1261 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 WSCD1Q658N2 575 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 USP37Q86T82 979 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 GPBP1Q86WP2 473 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 CXorf38Q8TB03 319 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 BPIFB1Q8TDL5 484 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 USP13Q92995 863 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-201ENST00000526271 BICD1Q96G01 975 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 RPF1Q9H9Y2 349 aaKnown RBP15.46■□□□□ 0.07
CPSF1-201ENST00000526271 KCND2Q9NZV8 630 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 HSFX1Q9UBD0 423 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 STYXL1Q9Y6J8 313 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 NUP205Q92621 2012 aa15.46■□□□□ 0.07
CPSF1-201ENST00000526271 K7ENM7 598 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 HNRNPDLO14979 420 aaKnown RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 HCRTO43612 131 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 PPP1R37O75864 691 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 HAPLN1P10915 354 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 SDHBP21912 280 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 MATR3P43243 847 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 RAP1GAPP47736 663 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 KCNA1Q09470 495 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 LRRC32Q14392 662 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 DHX8Q14562 1220 aaKnown RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 KARSQ15046 597 aaKnown RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 TMEM196Q5HYL7 178 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 DGKKQ5KSL6 1271 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 SDHAF4Q5VUM1 108 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 USP49Q70CQ1 688 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 KBTBD6Q86V97 674 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 YAF2Q8IY57 180 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 SLC22A12Q96S37 553 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 PKMYT1Q99640 499 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 SEPT5Q99719 369 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 MSTO1Q9BUK6 570 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 STRA6Q9BX79 667 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 OXCT2Q9BYC2 517 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 SPEGQ15772 3267 aa15.45■□□□□ 0.06
CPSF1-201ENST00000526271 HELZP42694 1942 aaKnown RBP15.45■□□□□ 0.06
CPSF1-201ENST00000526271 ZFYVE26Q68DK2 2539 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 EGFP01133 1207 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 ODC1P11926 461 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 PLCG1P19174 1290 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 NLRP12P59046 1061 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 TMEM132DQ14C87 1099 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 RILPL1Q5EBL4 403 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-201ENST00000526271 CMTM8Q8IZV2 173 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 CCSER1Q9C0I3 900 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 ARRDC1-AS1Q9H2J1 176 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 EBF3Q9H4W6 596 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 LARSQ9P2J5 1176 aaKnown RBP15.44■□□□□ 0.06
CPSF1-201ENST00000526271 MYOFQ9NZM1 2061 aa15.44■□□□□ 0.06
CPSF1-201ENST00000526271 CYB561D2O14569 222 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 AXIN1O15169 862 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 TRAK2O60296 914 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 PMLP29590 882 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 CNR2P34972 360 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 MCM2P49736 904 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 PPP2R5DQ14738 602 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 MGAT5BQ3V5L5 792 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 PLA2G2CQ5R387 149 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
CPSF1-201ENST00000526271 TXNDC8Q6A555 127 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 MCTP1Q6DN14 999 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 OSTM1Q86WC4 334 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 KCTD17Q8N5Z5 321 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 MYCT1Q8N699 235 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 MAB21L3Q8N8X9 362 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 RAD54LQ92698 747 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 FGFBP2Q9BYJ0 223 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 PARVGQ9HBI0 331 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 RAB23Q9ULC3 237 aa15.43■□□□□ 0.06
CPSF1-201ENST00000526271 TRDMT1O14717 391 aaKnown RBP15.42■□□□□ 0.06
CPSF1-201ENST00000526271 EPN2O95208 641 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 CHRM1P11229 460 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-201ENST00000526271 RUNX3Q13761 415 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 ITPRIPL2Q3MIP1 535 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 N4BP2L1Q5TBK1 243 aaPredicted RBP15.42■□□□□ 0.06
CPSF1-201ENST00000526271 TCEAL6Q6IPX3 200 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 SYNPOQ8N3V7 929 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 GAB3Q8WWW8 586 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 TCEAL3Q969E4 200 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
CPSF1-201ENST00000526271 PYM1Q9BRP8 204 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms