RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 USTQ9Y2C2 406 aa18.49■□□□□ 0.55
LMX1B-203ENST00000526117 INSL5Q9Y5Q6 135 aa18.49■□□□□ 0.55
LMX1B-203ENST00000526117 N4BP1O75113 896 aaKnown RBP18.48■□□□□ 0.55
LMX1B-203ENST00000526117 CCDC192P0DO97 292 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 PRKCSHP14314 528 aaPredicted RBP18.48■□□□□ 0.55
LMX1B-203ENST00000526117 ARPP19P56211 112 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 STX17P56962 302 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 PLD1Q13393 1074 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 KLHL40Q2TBA0 621 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 INTS6LQ5JSJ4 861 aaKnown RBP18.48■□□□□ 0.55
LMX1B-203ENST00000526117 TAS1R2Q8TE23 839 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 SMG7Q92540 1137 aaKnown RBP18.48■□□□□ 0.55
LMX1B-203ENST00000526117 TMEM209Q96SK2 561 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 MMS19Q96T76 1030 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 POMKQ9H5K3 350 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 WDR6Q9NNW5 1121 aaKnown RBP18.48■□□□□ 0.55
LMX1B-203ENST00000526117 RAB20Q9NX57 234 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 CDH9Q9ULB4 789 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 C2orf16Q68DN1 1984 aa18.48■□□□□ 0.55
LMX1B-203ENST00000526117 LOC730098B7Z3J9 87 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 PRRG1O14668 218 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 SEC24AO95486 1093 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 OR4Q2P0C623 313 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 NOP14P78316 857 aaKnown RBP18.47■□□□□ 0.55
LMX1B-203ENST00000526117 MAPRE1Q15691 268 aaKnown RBP18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CBWD6Q4V339 395 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 SLC39A12Q504Y0 691 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 DCAF17Q5H9S7 520 aaPredicted RBP18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CBWD3Q5JTY5 395 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CBWD5Q5RIA9 395 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 TCERG1LQ5VWI1 586 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 FAM171BQ6P995 826 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CCDC150Q8NCX0 1101 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 FUBP3Q96I24 572 aaKnown RBP eCLIP18.47■□□□□ 0.55
LMX1B-203ENST00000526117 APOL5Q9BWW9 433 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CYP3A43Q9HB55 503 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CYP4F11Q9HBI6 524 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 TMEM63CQ9P1W3 806 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 CLUHO75153 1309 aa18.47■□□□□ 0.55
LMX1B-203ENST00000526117 ASPAP45381 313 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 FMO5P49326 533 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 TUFMP49411 452 aaKnown RBP18.46■□□□□ 0.55
LMX1B-203ENST00000526117 INCA1Q0VD86 236 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 CFAP221Q4G0U5 840 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 LRRTM3Q86VH5 581 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 IRF2BP1Q8IU81 584 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 TTC39CQ8N584 583 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 UHRF1Q96T88 793 aaPredicted RBP18.46■□□□□ 0.55
LMX1B-203ENST00000526117 MRPL45Q9BRJ2 306 aaKnown RBP18.46■□□□□ 0.55
LMX1B-203ENST00000526117 NIF3L1Q9GZT8 377 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 ANO10Q9NW15 660 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 NXF1Q9UBU9 619 aaKnown RBP18.46■□□□□ 0.55
LMX1B-203ENST00000526117 YIPF1Q9Y548 306 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 ASB3Q9Y575 518 aa18.46■□□□□ 0.55
LMX1B-203ENST00000526117 LRG1P02750 347 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 GNL1P36915 607 aaPredicted RBP18.45■□□□□ 0.54
LMX1B-203ENST00000526117 SASS6Q6UVJ0 657 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 UNC93AQ86WB7 457 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 FAM114A1Q8IWE2 563 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 LEMD2Q8NC56 503 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 ENOX1Q8TC92 643 aaKnown RBP18.45■□□□□ 0.54
LMX1B-203ENST00000526117 SEMA4DQ92854 862 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 CNOT6LQ96LI5 555 aaKnown RBP18.45■□□□□ 0.54
LMX1B-203ENST00000526117 CEP295NLQ96MC4 621 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 SYT15Q9BQS2 421 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 CRISPLD1Q9H336 500 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 SNX25Q9H3E2 840 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 SMYD3Q9H7B4 428 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
LMX1B-203ENST00000526117 POLIQ9UNA4 740 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 PCDHB5Q9Y5E4 795 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 MUC3AQ02505 3323 aa18.45■□□□□ 0.54
LMX1B-203ENST00000526117 CCL16O15467 120 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 MICAL2O94851 1124 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 LMO2P25791 158 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 MAGEA11P43364 429 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 EPHA5P54756 1037 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 CETN1Q12798 172 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 DUSP4Q13115 394 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 STX1AQ16623 288 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 SMYD5Q6GMV2 418 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 C4orf50Q6ZRC1 276 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 ELMOD1Q8N336 334 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 ATAD1Q8NBU5 361 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 MYCBPAPQ8TBZ2 947 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 PGLYRP2Q96PD5 576 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 PIDD1Q9HB75 910 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 TMLHEQ9NVH6 421 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 CDH22Q9UJ99 828 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 NME7Q9Y5B8 376 aa18.44■□□□□ 0.54
LMX1B-203ENST00000526117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.44■□□□□ 0.54
LMX1B-203ENST00000526117 ZFP37Q9Y6Q3 630 aaPredicted RBP18.44■□□□□ 0.54
LMX1B-203ENST00000526117 LETM1O95202 739 aaPredicted RBP18.43■□□□□ 0.54
LMX1B-203ENST00000526117 AFPP02771 609 aaKnown RBP18.43■□□□□ 0.54
LMX1B-203ENST00000526117 WEE2P0C1S8 567 aa18.43■□□□□ 0.54
LMX1B-203ENST00000526117 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms