RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TAF12Q16514 161 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 CSRP2Q16527 193 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 CEP68Q76N32 757 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 METTL23Q86XA0 190 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 RASSF8Q8NHQ8 419 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 FIZ1Q96SL8 496 aa25.9■■□□□ 1.74
USP47-205ENST00000525257 WEE1P30291 646 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 MCM2P49736 904 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 TAF6P49848 677 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 GTF2BQ00403 316 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 ITPRIPL2Q3MIP1 535 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 ZC2HC1CQ53FD0 456 aaPredicted RBP25.89■■□□□ 1.74
USP47-205ENST00000525257 ADALQ6DHV7 355 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 THEM5Q8N1Q8 247 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 RAD54LQ92698 747 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 SLC46A2Q9BY10 475 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 ASB7Q9H672 318 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 THG1LQ9NWX6 298 aaKnown RBP25.89■■□□□ 1.74
USP47-205ENST00000525257 DPP3Q9NY33 737 aa25.89■■□□□ 1.74
USP47-205ENST00000525257 GDF9O60383 454 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 GRIN1Q05586 938 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 RABEP1Q15276 862 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 PPM1JQ5JR12 505 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 WSCD1Q658N2 575 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 LRRTM3Q86VH5 581 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 SYNPOQ8N3V7 929 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 FAM160A2Q8N612 972 aaPredicted RBP25.88■■□□□ 1.73
USP47-205ENST00000525257 TMX3Q96JJ7 454 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 ABI2Q9NYB9 513 aaPredicted RBP25.88■■□□□ 1.73
USP47-205ENST00000525257 C2CD2Q9Y426 696 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 CHD8Q9HCK8 2581 aa25.88■■□□□ 1.73
USP47-205ENST00000525257 ADRB1P08588 477 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 C8orf34Q49A92 452 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 PKN3Q6P5Z2 889 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 WDR5BQ86VZ2 330 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 SPPL2BQ8TCT7 592 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 C2orf15Q8WU43 125 aaKnown RBP25.87■■□□□ 1.73
USP47-205ENST00000525257 IKZF4Q9H2S9 585 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 GKN1Q9NS71 199 aa25.87■■□□□ 1.73
USP47-205ENST00000525257 AGO2Q9UKV8 859 aaKnown RBP25.87■■□□□ 1.73
USP47-205ENST00000525257 EXTL3O43909 919 aa25.86■■□□□ 1.73
USP47-205ENST00000525257 HAPLN1P10915 354 aaPredicted RBP25.86■■□□□ 1.73
USP47-205ENST00000525257 ABCD1P33897 745 aa25.86■■□□□ 1.73
USP47-205ENST00000525257 CMTM8Q8IZV2 173 aa25.86■■□□□ 1.73
USP47-205ENST00000525257 LARP4BQ92615 738 aaKnown RBP25.86■■□□□ 1.73
USP47-205ENST00000525257 CCL26Q9Y258 94 aa25.86■■□□□ 1.73
USP47-205ENST00000525257 DENND4CQ5VZ89 1909 aa25.86■■□□□ 1.73
USP47-205ENST00000525257 KRT37O76014 449 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 HOXA6P31267 233 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 PXNP49023 591 aaPredicted RBP25.85■■□□□ 1.73
USP47-205ENST00000525257 TRIM68Q6AZZ1 485 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 SLFN12LQ6IEE8 588 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 EFCAB13Q8IY85 973 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 MAB21L3Q8N8X9 362 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 HPS4Q9NQG7 708 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 ZNF638Q14966 1978 aaKnown RBP25.85■■□□□ 1.73
USP47-205ENST00000525257 OBSL1O75147 1896 aa25.85■■□□□ 1.73
USP47-205ENST00000525257 KCNA4P22459 653 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 LONP1P36776 959 aaKnown RBP25.84■■□□□ 1.73
USP47-205ENST00000525257 AVPR1AP37288 418 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 SMARCB1Q12824 385 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 PTPAQ15257 358 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 TMEM150AQ86TG1 271 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 DCP1BQ8IZD4 617 aaKnown RBP25.84■■□□□ 1.73
USP47-205ENST00000525257 STKLD1Q8NE28 680 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 FAM83CQ9BQN1 747 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 CCSER1Q9C0I3 900 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 EBF3Q9H4W6 596 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 STYXL1Q9Y6J8 313 aa25.84■■□□□ 1.73
USP47-205ENST00000525257 SDK1Q7Z5N4 2213 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 KPNA7A9QM74 516 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 TULP1O00294 542 aaPredicted RBP25.83■■□□□ 1.73
USP47-205ENST00000525257 CD2BP2O95400 341 aaKnown RBP25.83■■□□□ 1.73
USP47-205ENST00000525257 NLRP12P59046 1061 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 BFSP1Q12934 665 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 RUNX3Q13761 415 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 SV2CQ496J9 727 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 FSTL4Q6MZW2 842 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 CRELD2Q6UXH1 353 aaPredicted RBP25.83■■□□□ 1.73
USP47-205ENST00000525257 POMGNT1Q8WZA1 660 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 USP13Q92995 863 aaPredicted RBP25.83■■□□□ 1.73
USP47-205ENST00000525257 ST6GALNAC4Q9H4F1 302 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 TMLHEQ9NVH6 421 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 ZMYM5Q9UJ78 669 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 PCDHB5Q9Y5E4 795 aa25.83■■□□□ 1.73
USP47-205ENST00000525257 MAP1BP46821 2468 aaKnown RBP25.83■■□□□ 1.73
USP47-205ENST00000525257 OTOL1A6NHN0 477 aaPredicted RBP25.82■■□□□ 1.72
USP47-205ENST00000525257 AXIN1O15169 862 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 F11P03951 625 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 HMGA1P17096 107 aaKnown RBP25.82■■□□□ 1.72
USP47-205ENST00000525257 GPR15P49685 360 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 GRSF1Q12849 480 aaKnown RBP eCLIP25.82■■□□□ 1.72
USP47-205ENST00000525257 CCDC6Q16204 474 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 TMEM196Q5HYL7 178 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 SFR1Q86XK3 245 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 KRI1Q8N9T8 703 aaKnown RBP25.82■■□□□ 1.72
USP47-205ENST00000525257 CHFRQ96EP1 664 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 PI4K2AQ9BTU6 479 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 ARRDC1-AS1Q9H2J1 176 aa25.82■■□□□ 1.72
USP47-205ENST00000525257 MAGED2Q9UNF1 606 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms