RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 ZBTB22O15209 634 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 MGEA5O60502 916 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 DUSP11O75319 330 aaKnown RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 ZNF131P52739 623 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 CRYBB1P53674 252 aaPredicted RBP17.89■□□□□ 0.45
BEST1-203ENST00000524877 PRAMEP78395 509 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 LAMB3Q13751 1172 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 SLC30A5Q8TAD4 765 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 SH3KBP1Q96B97 665 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 ASB7Q9H672 318 aa17.89■□□□□ 0.45
BEST1-203ENST00000524877 MOXD2PA6NHM9 499 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 CCDC188H7C350 402 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 SNX2O60749 519 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 PTGER2P43116 358 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 ZNF467Q7Z7K2 595 aaPredicted RBP17.88■□□□□ 0.45
BEST1-203ENST00000524877 HACD3Q9P035 362 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 GOLGA8QA0A0J9YX86 632 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 GOLGA8OA6NCC3 632 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 GOLGA8NF8WBI6 632 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 SELPP16109 830 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 CHUKO15111 745 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 SEPT4O43236 478 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 CCT5P48643 541 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
BEST1-203ENST00000524877 PID1Q7Z2X4 250 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
BEST1-203ENST00000524877 ANKRD20A3Q5VUR7 823 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 SYT15Q9BQS2 421 aa17.88■□□□□ 0.45
BEST1-203ENST00000524877 TTC26A0AVF1 554 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 ARHGAP42A6NI28 874 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 SOCS7O14512 581 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 SYNCRIPO60506 623 aaKnown RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 RNF40O75150 1001 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 RASSF2P50749 326 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 KCNA10Q16322 511 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 CCDC60Q8IWA6 550 aaPredicted RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 DCLK2Q8N568 766 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 PPHLN1Q8NEY8 458 aaKnown RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 EPB41L5Q9HCM4 733 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 ATP8B1O43520 1251 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 HNRNPCP07910 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
BEST1-203ENST00000524877 GFAPP14136 432 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 TUFMP49411 452 aaKnown RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 ARL4DP49703 201 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 PABPC5Q96DU9 382 aaKnown RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 CAPS2Q9BXY5 557 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 METTL5Q9NRN9 209 aaKnown RBP17.87■□□□□ 0.45
BEST1-203ENST00000524877 TTI1O43156 1089 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 GRAP2O75791 330 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 MT-ND3P03897 115 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 FAM71BQ8TC56 605 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 HDAC6Q9UBN7 1215 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 ATXN3LQ9H3M9 355 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 FBXO44Q9H4M3 255 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 LRRC37A3O60309 1634 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 APBA1Q02410 837 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 MTA1Q13330 715 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 NOMO2Q5JPE7 1267 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 PORCNQ9H237 461 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 WDCPQ9H6R7 721 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 SLC28A3Q9HAS3 691 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 MKL2Q9ULH7 1088 aa17.87■□□□□ 0.45
BEST1-203ENST00000524877 IQANK1A0A1B0GTG1 560 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 GPR25O00155 361 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 GPC4O75487 556 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 RTN3O95197 1032 aaPredicted RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 ACADMP11310 421 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 YBX3P16989 372 aaKnown RBP eCLIP17.86■□□□□ 0.45
BEST1-203ENST00000524877 SYTL3Q4VX76 610 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CTU1Q7Z7A3 348 aaKnown RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 PURBQ96QR8 312 aaKnown RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 TMEM134Q9H6X4 195 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 BFARQ9NZS9 450 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 GOLGA8KD6RF30 607 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 F5H423 210 aaPredicted RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 CHEK2O96017 543 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 MYBPC2Q14324 1141 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 MAML3Q96JK9 1138 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 GDAP1L1Q96MZ0 367 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CBWD1Q9BRT8 395 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 AGXT2Q9BYV1 514 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 TEX33O43247 280 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 DNAJC6O75061 913 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 TMED2Q15363 201 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CARNMT1Q8N4J0 409 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CINPQ9BW66 212 aaPredicted RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 FHOD1Q9Y613 1164 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 IRX4P78413 519 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CAV1Q03135 178 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 POLD3Q15054 466 aaPredicted RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 CYFIP2Q96F07 1278 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 SARS2Q9NP81 518 aaKnown RBP17.86■□□□□ 0.45
BEST1-203ENST00000524877 NDFIP2Q9NV92 336 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 RWDD3Q9Y3V2 267 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CNTNAP2Q9UHC6 1331 aa17.86■□□□□ 0.45
BEST1-203ENST00000524877 CYTH3O43739 400 aa17.85■□□□□ 0.45
BEST1-203ENST00000524877 MAFO75444 373 aaPredicted RBP17.85■□□□□ 0.45
BEST1-203ENST00000524877 RAP1GAPP47736 663 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms