RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 COLGALT1Q8NBJ5 622 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 SAMD11Q96NU1 681 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 CASD1Q96PB1 797 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 FNBP1Q96RU3 617 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ACO2Q99798 780 aaKnown RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 MSTO1Q9BUK6 570 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 APOL6Q9BWW8 343 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 CWH43Q9H720 699 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 PTPRHQ9HD43 1115 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 RBAKQ9NYW8 714 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 ADAMTS1Q9UHI8 967 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 LCMT1Q9UIC8 334 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 SNX12Q9UMY4 172 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 PCDHGC3Q9UN70 934 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 CNTN6Q9UQ52 1028 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 TNFSF13BQ9Y275 285 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 HES2Q9Y543 173 aa7.57□□□□□ -1.2
VPS11-201ENST00000524454 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.57□□□□□ -1.2
VPS11-201ENST00000524454 SPTBN5Q9NRC6 3674 aaKnown RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 PRUNE2Q8WUY3 3088 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 UNC80Q8N2C7 3258 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 A0A0U1RQF3 1178 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CTAGE15A4D2H0 777 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 GRID2IPA4D2P6 1211 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ANKRD62A6NC57 917 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ABLIM1O14639 778 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ATP8B1O43520 1251 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 B4GALT3O60512 393 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 MTA2O94776 668 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 PRKCBP05771 671 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 H2AFZP0C0S5 128 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CTAGE8P0CG41 777 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 MCF2P10911 925 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 POU3F3P20264 500 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 GCLMP48507 274 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 AFF1P51825 1210 aaKnown RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 DLG4P78352 724 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CYP27A1Q02318 531 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 GFPT1Q06210 699 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 CAMK1Q14012 370 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 TCEAL5Q5H9L2 206 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 WDR44Q5JSH3 913 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 MPZL3Q6UWV2 235 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CRELD2Q6UXH1 353 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 TRIM72Q6ZMU5 477 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 FAM43BQ6ZT52 329 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 EP400NLQ6ZTU2 488 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 H2AFVQ71UI9 128 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 SLFN11Q7Z7L1 901 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ADGRD2Q7Z7M1 963 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CTAGE6Q86UF2 777 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CD302Q8IX05 232 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CTAGE4Q8IX94 777 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ABI1Q8IZP0 508 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 MSANTD4Q8NCY6 345 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 OLIG1Q8TAK6 271 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 PLEKHO2Q8TD55 490 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 EPS8L1Q8TE68 723 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CTNNBL1Q8WYA6 563 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 RFFLQ8WZ73 363 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 MRPL38Q96DV4 380 aaKnown RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 TRIM11Q96F44 468 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 FAM213AQ9BRX8 229 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 C11orf84Q9BUA3 381 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 IRX2Q9BZI1 471 aaPredicted RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 IMPG2Q9BZV3 1241 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ISCUQ9H1K1 167 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 IKZF4Q9H2S9 585 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 PCIF1Q9H4Z3 704 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 ELAC1Q9H777 363 aaKnown RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 CHST12Q9NRB3 414 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 CPSF3Q9UKF6 684 aaKnown RBP7.56□□□□□ -1.2
VPS11-201ENST00000524454 PCDHB2Q9Y5E7 798 aa7.56□□□□□ -1.2
VPS11-201ENST00000524454 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 CCDC151A5D8V7 595 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 TISP43B9A030 160 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 C5orf67F2Z3F1 127 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS11-201ENST00000524454 LINC01565O15544 149 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 FGF18O76093 207 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 CLSTN1O94985 981 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 NPTXRO95502 500 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 POMCP01189 267 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 C4BPAP04003 597 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 MYBL1P10243 752 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 H2AFXP16104 143 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 ARF4P18085 180 aaPredicted RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 PDE6CP51160 858 aa7.55□□□□□ -1.2
VPS11-201ENST00000524454 YWHAEP62258 255 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 RBM10P98175 930 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 PRPF4BQ13523 1007 aaKnown RBP7.55□□□□□ -1.2
VPS11-201ENST00000524454 PTPROQ16827 1216 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms