RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CCDC6Q16204 474 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 MGAT5BQ3V5L5 792 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 TMEM196Q5HYL7 178 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 CD302Q8IX05 232 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 HPS4Q9NQG7 708 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 GKN1Q9NS71 199 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 THG1LQ9NWX6 298 aaKnown RBP24.62■■□□□ 1.53
PVT1-218ENST00000523328 ODF2LQ9ULJ1 636 aa24.62■■□□□ 1.53
PVT1-218ENST00000523328 RPP40O75818 363 aaKnown RBP24.61■■□□□ 1.53
PVT1-218ENST00000523328 PMLP29590 882 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 FSTL4Q6MZW2 842 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 SLC39A4Q6P5W5 647 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 CACNA2D4Q7Z3S7 1137 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 KBTBD6Q86V97 674 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 CMTM8Q8IZV2 173 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 FAM212AQ96EL1 285 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 REEP2Q9BRK0 252 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 CHD6Q8TD26 2715 aa24.61■■□□□ 1.53
PVT1-218ENST00000523328 OTOL1A6NHN0 477 aaPredicted RBP24.6■■□□□ 1.53
PVT1-218ENST00000523328 EIF5BO60841 1220 aaKnown RBP24.6■■□□□ 1.53
PVT1-218ENST00000523328 PTPAQ15257 358 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 N4BP2L1Q5TBK1 243 aaPredicted RBP24.6■■□□□ 1.53
PVT1-218ENST00000523328 TMEM150AQ86TG1 271 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 LRRTM3Q86VH5 581 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 C12orf50Q8NA57 414 aaPredicted RBP24.6■■□□□ 1.53
PVT1-218ENST00000523328 GIPC2Q8TF65 315 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 CDK5RAP3Q96JB5 506 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 GCNAQ96QF7 691 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 MSTO1Q9BUK6 570 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 ANGPTL2Q9UKU9 493 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 DSEQ9UL01 958 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 CCL26Q9Y258 94 aa24.6■■□□□ 1.53
PVT1-218ENST00000523328 VWA3AA6NCI4 1184 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 TRDMT1O14717 391 aaKnown RBP24.59■■□□□ 1.53
PVT1-218ENST00000523328 SCP2P22307 547 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 ZNF131P52739 623 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 RUNX3Q13761 415 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 TMEM132DQ14C87 1099 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 RILPL1Q5EBL4 403 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 PLA2G2CQ5R387 149 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 LRRC15Q8TF66 581 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 ZMYM5Q9UJ78 669 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 DERAQ9Y315 318 aa24.59■■□□□ 1.53
PVT1-218ENST00000523328 K7ENM7 598 aa24.58■■□□□ 1.53
PVT1-218ENST00000523328 HAPLN1P10915 354 aaPredicted RBP24.58■■□□□ 1.53
PVT1-218ENST00000523328 GRSF1Q12849 480 aaKnown RBP eCLIP24.58■■□□□ 1.53
PVT1-218ENST00000523328 TRIM68Q6AZZ1 485 aa24.58■■□□□ 1.53
PVT1-218ENST00000523328 SPPL2BQ8TCT7 592 aa24.58■■□□□ 1.53
PVT1-218ENST00000523328 C2orf15Q8WU43 125 aaKnown RBP24.58■■□□□ 1.53
PVT1-218ENST00000523328 USP13Q92995 863 aaPredicted RBP24.58■■□□□ 1.53
PVT1-218ENST00000523328 EBF3Q9H4W6 596 aa24.58■■□□□ 1.53
PVT1-218ENST00000523328 LAMA1P25391 3075 aa24.58■■□□□ 1.52
PVT1-218ENST00000523328 MYO16Q9Y6X6 1858 aa24.58■■□□□ 1.52
PVT1-218ENST00000523328 CYB561D2O14569 222 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 ATG13O75143 517 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 AKAP3O75969 853 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 CCDC192P0DO97 292 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 HMGA1P17096 107 aaKnown RBP24.57■■□□□ 1.52
PVT1-218ENST00000523328 NMT1P30419 496 aaKnown RBP24.57■■□□□ 1.52
PVT1-218ENST00000523328 NLRP12P59046 1061 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 SHC2P98077 582 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 SMARCB1Q12824 385 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 TAF12Q16514 161 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 STPG1Q5TH74 334 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 MYCT1Q8N699 235 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 MAB21L3Q8N8X9 362 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 RIN3Q8TB24 985 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 ZC3H10Q96K80 434 aaKnown RBP24.57■■□□□ 1.52
PVT1-218ENST00000523328 FIZ1Q96SL8 496 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 ASB7Q9H672 318 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 POLR3BQ9NW08 1133 aaPredicted RBP24.57■■□□□ 1.52
PVT1-218ENST00000523328 SLC8A2Q9UPR5 921 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 C2CD2Q9Y426 696 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 PCDHGA5Q9Y5G8 931 aa24.57■■□□□ 1.52
PVT1-218ENST00000523328 KIAA1549LQ6ZVL6 1849 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 TRAK2O60296 914 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 EGFP01133 1207 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 F11P03951 625 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 AVPR1AP37288 418 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 WSCD1Q658N2 575 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 ARL6IP4Q66PJ3 421 aaKnown RBP24.56■■□□□ 1.52
PVT1-218ENST00000523328 GPBP1Q86WP2 473 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 METTL23Q86XA0 190 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 THEM5Q8N1Q8 247 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 KIF2CQ99661 725 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 PYM1Q9BRP8 204 aaKnown RBP24.56■■□□□ 1.52
PVT1-218ENST00000523328 CCSER1Q9C0I3 900 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 SMOC1Q9H4F8 434 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 PARVGQ9HBI0 331 aa24.56■■□□□ 1.52
PVT1-218ENST00000523328 FBRSL1Q9HCM7 1045 aaKnown RBP24.56■■□□□ 1.52
PVT1-218ENST00000523328 ABI2Q9NYB9 513 aaPredicted RBP24.56■■□□□ 1.52
PVT1-218ENST00000523328 ANKRD63C9JTQ0 380 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 RNF40O75150 1001 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 FAM13AO94988 1023 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 ARSAP15289 507 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 MPLP40238 635 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 ACOT2P49753 483 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 TAF6P49848 677 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 GTF2BQ00403 316 aa24.55■■□□□ 1.52
PVT1-218ENST00000523328 MCTP1Q6DN14 999 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms